Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	AAT1	YKL106W	1356 nt		5.51	□□□□□ -1.53
DDR2	P89113	YRF1-5	YLR467W	5391 nt		5.51	□□□□□ -1.53
DDR2	P89113	YRF1-8	YOR396W	5391 nt		5.51	□□□□□ -1.53
DDR2	P89113	TRP2	YER090W	1524 nt		5.5	□□□□□ -1.53
DDR2	P89113	YEL008W	YEL008W	381 nt		5.5	□□□□□ -1.53
DDR2	P89113	EMC3	YKL207W	762 nt		5.5	□□□□□ -1.53
DDR2	P89113	AAC3	YBR085W	924 nt		5.5	□□□□□ -1.53
DDR2	P89113	UFD1	YGR048W	1086 nt		5.49	□□□□□ -1.53
DDR2	P89113	FUN14	YAL008W	597 nt		5.49	□□□□□ -1.53
DDR2	P89113	YKL053W	YKL053W	375 nt		5.49	□□□□□ -1.53
DDR2	P89113	YMR210W	YMR210W	1350 nt		5.49	□□□□□ -1.53
DDR2	P89113	SRP54	YPR088C	1626 nt		5.48	□□□□□ -1.53
DDR2	P89113	YPT11	YNL304W	1254 nt		5.48	□□□□□ -1.53
DDR2	P89113	DUR3	YHL016C	2208 nt		5.48	□□□□□ -1.53
DDR2	P89113	TPN1	YGL186C	1740 nt		5.48	□□□□□ -1.53
DDR2	P89113	TMS1	YDR105C	1422 nt		5.48	□□□□□ -1.53
DDR2	P89113	FIT1	YDR534C	1587 nt		5.47	□□□□□ -1.53
DDR2	P89113	GSF2	YML048W	1212 nt		5.47	□□□□□ -1.53
DDR2	P89113	ADE16	YLR028C	1776 nt		5.47	□□□□□ -1.53
DDR2	P89113	GAS1	YMR307W	1680 nt		5.47	□□□□□ -1.53
DDR2	P89113	YLR072W	YLR072W	2082 nt		5.46	□□□□□ -1.53
DDR2	P89113	TPC1	YGR096W	945 nt		5.46	□□□□□ -1.54
DDR2	P89113	FSH2	YMR222C	672 nt		5.46	□□□□□ -1.54
DDR2	P89113	REX2	YLR059C	810 nt		5.45	□□□□□ -1.54
DDR2	P89113	snR4	snR4	186 nt		5.45	□□□□□ -1.54
DDR2	P89113	NAM8	YHR086W	1572 nt		5.45	□□□□□ -1.54
DDR2	P89113	POP2	YNR052C	1302 nt		5.45	□□□□□ -1.54
DDR2	P89113	snR86	snR86	1004 nt		5.43	□□□□□ -1.54
DDR2	P89113	PTC6	YCR079W	1329 nt		5.43	□□□□□ -1.54
DDR2	P89113	DIA4	YHR011W	1341 nt		5.43	□□□□□ -1.54
DDR2	P89113	SRM1	YGL097W	1449 nt		5.42	□□□□□ -1.54
DDR2	P89113	TUB4	YLR212C	1422 nt		5.42	□□□□□ -1.54
DDR2	P89113	YIR035C	YIR035C	765 nt		5.42	□□□□□ -1.54
DDR2	P89113	LEA1	YPL213W	717 nt		5.42	□□□□□ -1.54
DDR2	P89113	LYS20	YDL182W	1287 nt		5.41	□□□□□ -1.54
DDR2	P89113	ESS1	YJR017C	513 nt		5.41	□□□□□ -1.54
DDR2	P89113	LPD1	YFL018C	1500 nt		5.41	□□□□□ -1.54
DDR2	P89113	PAR32	YDL173W	888 nt		5.4	□□□□□ -1.54
DDR2	P89113	THP3	YPR045C	1413 nt		5.4	□□□□□ -1.55
DDR2	P89113	NIF3	YGL221C	867 nt		5.39	□□□□□ -1.55
DDR2	P89113	YJL009W	YJL009W	327 nt		5.39	□□□□□ -1.55
DDR2	P89113	RSM7	YJR113C	744 nt		5.39	□□□□□ -1.55
DDR2	P89113	HIS3	YOR202W	663 nt		5.39	□□□□□ -1.55
DDR2	P89113	DUS3	YLR401C	2007 nt		5.39	□□□□□ -1.55
DDR2	P89113	BUB2	YMR055C	921 nt		5.38	□□□□□ -1.55
DDR2	P89113	KRE1	YNL322C	942 nt		5.38	□□□□□ -1.55
DDR2	P89113	YBR056W	YBR056W	1506 nt		5.37	□□□□□ -1.55
DDR2	P89113	SPE2	YOL052C	1191 nt		5.36	□□□□□ -1.55
DDR2	P89113	PFS2	YNL317W	1398 nt		5.36	□□□□□ -1.55
DDR2	P89113	GAL2	YLR081W	1725 nt		5.36	□□□□□ -1.55
DDR2	P89113	FTH1	YBR207W	1398 nt		5.35	□□□□□ -1.55
DDR2	P89113	TIF3	YPR163C	1311 nt		5.35	□□□□□ -1.55
DDR2	P89113	SDS24	YBR214W	1584 nt		5.33	□□□□□ -1.56
DDR2	P89113	VBA3	YCL069W	1377 nt		5.33	□□□□□ -1.56
DDR2	P89113	SLM3	YDL033C	1254 nt		5.33	□□□□□ -1.56
DDR2	P89113	CPD1	YGR247W	720 nt		5.33	□□□□□ -1.56
DDR2	P89113	APS2	YJR058C	444 nt		5.33	□□□□□ -1.56
DDR2	P89113	YKR012C	YKR012C	378 nt		5.33	□□□□□ -1.56
DDR2	P89113	YNL140C	YNL140C	570 nt		5.33	□□□□□ -1.56
DDR2	P89113	ABP1	YCR088W	1779 nt		5.33	□□□□□ -1.56
DDR2	P89113	GTB1	YDR221W	2109 nt		5.33	□□□□□ -1.56
DDR2	P89113	NDE2	YDL085W	1638 nt		5.33	□□□□□ -1.56
DDR2	P89113	ILV2	YMR108W	2064 nt		5.33	□□□□□ -1.56
DDR2	P89113	HSV2	YGR223C	1347 nt		5.32	□□□□□ -1.56
DDR2	P89113	BUD31	YCR063W	474 nt		5.32	□□□□□ -1.56
DDR2	P89113	YJR149W	YJR149W	1215 nt		5.32	□□□□□ -1.56
DDR2	P89113	MDH2	YOL126C	1134 nt		5.32	□□□□□ -1.56
DDR2	P89113	STE4	YOR212W	1272 nt		5.32	□□□□□ -1.56
DDR2	P89113	MET30	YIL046W	1923 nt		5.31	□□□□□ -1.56
DDR2	P89113	GLY1	YEL046C	1164 nt		5.31	□□□□□ -1.56
DDR2	P89113	NAS2	YIL007C	663 nt		5.31	□□□□□ -1.56
DDR2	P89113	TDA4	YJR116W	840 nt		5.31	□□□□□ -1.56
DDR2	P89113	YLR460C	YLR460C	1131 nt		5.31	□□□□□ -1.56
DDR2	P89113	ENO1	YGR254W	1314 nt		5.3	□□□□□ -1.56
DDR2	P89113	YFR020W	YFR020W	699 nt		5.3	□□□□□ -1.56
DDR2	P89113	INM1	YHR046C	888 nt		5.3	□□□□□ -1.56
DDR2	P89113	YNL190W	YNL190W	615 nt		5.3	□□□□□ -1.56
DDR2	P89113	TGL5	YOR081C	2250 nt		5.3	□□□□□ -1.56
DDR2	P89113	YGR137W	YGR137W	375 nt		5.28	□□□□□ -1.56
DDR2	P89113	CHS7	YHR142W	951 nt		5.28	□□□□□ -1.56
DDR2	P89113	YLR349W	YLR349W	507 nt		5.28	□□□□□ -1.56
DDR2	P89113	YEL034C-A	YEL034C-A	603 nt		5.27	□□□□□ -1.57
DDR2	P89113	CDD1	YLR245C	429 nt		5.27	□□□□□ -1.57
DDR2	P89113	OLA1	YBR025C	1185 nt		5.27	□□□□□ -1.57
DDR2	P89113	MEP1	YGR121C	1479 nt		5.26	□□□□□ -1.57
DDR2	P89113	IGD1	YFR017C	588 nt		5.26	□□□□□ -1.57
DDR2	P89113	STP3	YLR375W	1032 nt		5.26	□□□□□ -1.57
DDR2	P89113	RCF1	YML030W	480 nt		5.26	□□□□□ -1.57
DDR2	P89113	INO1	YJL153C	1602 nt		5.26	□□□□□ -1.57
DDR2	P89113	WSC3	YOL105C	1671 nt		5.25	□□□□□ -1.57
DDR2	P89113	RPL2A	YFR031C-A	765 nt		5.25	□□□□□ -1.57
DDR2	P89113	PHB2	YGR231C	933 nt		5.25	□□□□□ -1.57
DDR2	P89113	EHT1	YBR177C	1356 nt		5.25	□□□□□ -1.57
DDR2	P89113	SRP102	YKL154W	735 nt		5.24	□□□□□ -1.57
DDR2	P89113	AIM34	YMR003W	597 nt		5.24	□□□□□ -1.57
DDR2	P89113	ADH3	YMR083W	1128 nt		5.24	□□□□□ -1.57
DDR2	P89113	MRN1	YPL184C	1839 nt		5.24	□□□□□ -1.57
DDR2	P89113	PMT7	YDR307W	1989 nt		5.24	□□□□□ -1.57
DDR2	P89113	CYC3	YAL039C	810 nt		5.23	□□□□□ -1.57
DDR2	P89113	KTR4	YBR199W	1395 nt		5.23	□□□□□ -1.57

Retrieved 100 of 7,029 protein–RNA pairs in 73.1 ms