Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Atf1P81269 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf1P81269 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf1P81269 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf1P81269 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atf1P81269 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf1P81269 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf1P81269 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Atf1P81269 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.65■□□□□ 0.9
Atf1P81269 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atf1P81269 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Atf1P81269 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.63■□□□□ 0.89
Atf1P81269 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Atf1P81269 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.63■□□□□ 0.89
Atf1P81269 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf1P81269 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf1P81269 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.62■□□□□ 0.89
Atf1P81269 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.62■□□□□ 0.89
Atf1P81269 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.62■□□□□ 0.89
Atf1P81269 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf1P81269 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf1P81269 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atf1P81269 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Atf1P81269 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf1P81269 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf1P81269 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atf1P81269 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf1P81269 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf1P81269 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf1P81269 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf1P81269 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf1P81269 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf1P81269 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.59■□□□□ 0.89
Atf1P81269 Gm45855-201ENSMUST00000212546 880 ntBASIC20.59■□□□□ 0.89
Atf1P81269 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf1P81269 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Atf1P81269 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf1P81269 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atf1P81269 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atf1P81269 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf1P81269 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf1P81269 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.57■□□□□ 0.88
Atf1P81269 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atf1P81269 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf1P81269 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.56■□□□□ 0.88
Atf1P81269 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf1P81269 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf1P81269 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Atf1P81269 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Atf1P81269 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf1P81269 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf1P81269 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf1P81269 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf1P81269 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf1P81269 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf1P81269 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf1P81269 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf1P81269 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atf1P81269 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Atf1P81269 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Atf1P81269 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atf1P81269 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Atf1P81269 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atf1P81269 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Atf1P81269 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf1P81269 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf1P81269 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf1P81269 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf1P81269 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atf1P81269 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf1P81269 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf1P81269 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf1P81269 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Atf1P81269 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf1P81269 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf1P81269 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Atf1P81269 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf1P81269 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Atf1P81269 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Atf1P81269 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atf1P81269 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.45■□□□□ 0.86
Atf1P81269 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Atf1P81269 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf1P81269 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atf1P81269 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf1P81269 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Atf1P81269 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf1P81269 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf1P81269 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf1P81269 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf1P81269 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.4■□□□□ 0.86
Atf1P81269 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf1P81269 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf1P81269 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf1P81269 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atf1P81269 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf1P81269 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.38■□□□□ 0.85
Atf1P81269 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf1P81269 Gm30023-201ENSMUST00000197970 889 ntBASIC20.38■□□□□ 0.85
Atf1P81269 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms