Protein–RNA interactions for Protein: P62965

Crabp1, Cellular retinoic acid-binding protein 1, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crabp1P62965 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Crabp1P62965 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Crabp1P62965 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Crabp1P62965 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.26■□□□□ 0.99
Crabp1P62965 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Crabp1P62965 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.25■□□□□ 0.99
Crabp1P62965 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Crabp1P62965 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Crabp1P62965 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Crabp1P62965 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.23■□□□□ 0.99
Crabp1P62965 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Crabp1P62965 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Crabp1P62965 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crabp1P62965 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crabp1P62965 Gm45855-201ENSMUST00000212546 880 ntBASIC21.22■□□□□ 0.99
Crabp1P62965 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.22■□□□□ 0.99
Crabp1P62965 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crabp1P62965 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.21■□□□□ 0.99
Crabp1P62965 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crabp1P62965 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Crabp1P62965 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Crabp1P62965 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Crabp1P62965 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Crabp1P62965 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crabp1P62965 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crabp1P62965 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crabp1P62965 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Crabp1P62965 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Crabp1P62965 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Crabp1P62965 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Crabp1P62965 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Crabp1P62965 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.16■□□□□ 0.98
Crabp1P62965 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Crabp1P62965 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Crabp1P62965 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Crabp1P62965 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Crabp1P62965 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crabp1P62965 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.15■□□□□ 0.98
Crabp1P62965 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Crabp1P62965 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crabp1P62965 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Crabp1P62965 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.14■□□□□ 0.97
Crabp1P62965 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Crabp1P62965 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crabp1P62965 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Crabp1P62965 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Crabp1P62965 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Crabp1P62965 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Crabp1P62965 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Crabp1P62965 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Crabp1P62965 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Crabp1P62965 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Crabp1P62965 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Crabp1P62965 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Crabp1P62965 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Crabp1P62965 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.09■□□□□ 0.97
Crabp1P62965 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crabp1P62965 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crabp1P62965 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crabp1P62965 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Crabp1P62965 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Crabp1P62965 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Crabp1P62965 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Crabp1P62965 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Crabp1P62965 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.06■□□□□ 0.96
Crabp1P62965 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Crabp1P62965 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Crabp1P62965 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Crabp1P62965 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Crabp1P62965 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Crabp1P62965 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Crabp1P62965 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Crabp1P62965 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crabp1P62965 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crabp1P62965 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crabp1P62965 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Crabp1P62965 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Crabp1P62965 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.03■□□□□ 0.96
Crabp1P62965 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Crabp1P62965 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crabp1P62965 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.02■□□□□ 0.96
Crabp1P62965 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crabp1P62965 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.02■□□□□ 0.95
Crabp1P62965 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Crabp1P62965 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21■□□□□ 0.95
Crabp1P62965 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Crabp1P62965 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21■□□□□ 0.95
Crabp1P62965 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Crabp1P62965 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Crabp1P62965 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crabp1P62965 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crabp1P62965 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crabp1P62965 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crabp1P62965 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crabp1P62965 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Crabp1P62965 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.98■□□□□ 0.95
Crabp1P62965 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Crabp1P62965 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Crabp1P62965 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crabp1P62965 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms