Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr8P56484 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccr8P56484 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr8P56484 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr8P56484 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr8P56484 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr8P56484 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr8P56484 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr8P56484 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr8P56484 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ccr8P56484 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr8P56484 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ccr8P56484 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr8P56484 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr8P56484 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccr8P56484 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr8P56484 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr8P56484 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.43■□□□□ 0.86
Ccr8P56484 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr8P56484 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr8P56484 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr8P56484 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr8P56484 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ccr8P56484 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr8P56484 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr8P56484 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr8P56484 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr8P56484 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr8P56484 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.41■□□□□ 0.86
Ccr8P56484 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccr8P56484 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr8P56484 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccr8P56484 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr8P56484 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr8P56484 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccr8P56484 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr8P56484 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr8P56484 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr8P56484 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr8P56484 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr8P56484 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr8P56484 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr8P56484 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr8P56484 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr8P56484 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr8P56484 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr8P56484 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Ccr8P56484 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.35■□□□□ 0.85
Ccr8P56484 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ccr8P56484 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.35■□□□□ 0.85
Ccr8P56484 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr8P56484 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr8P56484 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccr8P56484 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr8P56484 Gm30023-201ENSMUST00000197970 889 ntBASIC20.33■□□□□ 0.85
Ccr8P56484 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr8P56484 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr8P56484 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccr8P56484 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr8P56484 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ccr8P56484 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccr8P56484 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr8P56484 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr8P56484 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr8P56484 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ccr8P56484 Nkain2-201ENSMUST00000092602 558 ntBASIC20.3■□□□□ 0.84
Ccr8P56484 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr8P56484 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Ccr8P56484 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccr8P56484 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr8P56484 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr8P56484 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr8P56484 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr8P56484 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr8P56484 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Ccr8P56484 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccr8P56484 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccr8P56484 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Ccr8P56484 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccr8P56484 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr8P56484 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr8P56484 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr8P56484 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr8P56484 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccr8P56484 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccr8P56484 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.25■□□□□ 0.83
Ccr8P56484 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr8P56484 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr8P56484 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccr8P56484 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr8P56484 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccr8P56484 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr8P56484 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Ccr8P56484 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccr8P56484 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr8P56484 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr8P56484 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.23■□□□□ 0.83
Ccr8P56484 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccr8P56484 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccr8P56484 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms