Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdx1P52946 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdx1P52946 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdx1P52946 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdx1P52946 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdx1P52946 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pdx1P52946 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdx1P52946 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdx1P52946 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdx1P52946 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdx1P52946 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pdx1P52946 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pdx1P52946 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdx1P52946 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdx1P52946 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.73■■□□□ 1.39
Pdx1P52946 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.73■■□□□ 1.39
Pdx1P52946 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.72■■□□□ 1.39
Pdx1P52946 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.72■■□□□ 1.39
Pdx1P52946 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdx1P52946 Gm30023-201ENSMUST00000197970 889 ntBASIC23.71■■□□□ 1.39
Pdx1P52946 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdx1P52946 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.71■■□□□ 1.39
Pdx1P52946 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Pdx1P52946 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Pdx1P52946 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdx1P52946 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Pdx1P52946 Nkain2-201ENSMUST00000092602 558 ntBASIC23.69■■□□□ 1.38
Pdx1P52946 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.69■■□□□ 1.38
Pdx1P52946 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdx1P52946 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.68■■□□□ 1.38
Pdx1P52946 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
Pdx1P52946 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Pdx1P52946 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pdx1P52946 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pdx1P52946 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdx1P52946 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.66■■□□□ 1.38
Pdx1P52946 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdx1P52946 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdx1P52946 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdx1P52946 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdx1P52946 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdx1P52946 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Pdx1P52946 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdx1P52946 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdx1P52946 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pdx1P52946 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pdx1P52946 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pdx1P52946 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pdx1P52946 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pdx1P52946 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pdx1P52946 Gm6821-201ENSMUST00000107540 542 ntBASIC23.6■■□□□ 1.37
Pdx1P52946 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pdx1P52946 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdx1P52946 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdx1P52946 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pdx1P52946 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pdx1P52946 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Pdx1P52946 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pdx1P52946 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pdx1P52946 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.58■■□□□ 1.36
Pdx1P52946 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pdx1P52946 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pdx1P52946 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pdx1P52946 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pdx1P52946 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pdx1P52946 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
Pdx1P52946 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pdx1P52946 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pdx1P52946 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.56■■□□□ 1.36
Pdx1P52946 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Pdx1P52946 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pdx1P52946 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Pdx1P52946 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pdx1P52946 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pdx1P52946 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pdx1P52946 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pdx1P52946 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.52■■□□□ 1.36
Pdx1P52946 Gm8503-201ENSMUST00000118131 455 ntBASIC23.51■■□□□ 1.35
Pdx1P52946 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pdx1P52946 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.5■■□□□ 1.35
Pdx1P52946 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.49■■□□□ 1.35
Pdx1P52946 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.49■■□□□ 1.35
Pdx1P52946 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pdx1P52946 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.49■■□□□ 1.35
Pdx1P52946 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pdx1P52946 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Pdx1P52946 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.49■■□□□ 1.35
Pdx1P52946 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pdx1P52946 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.48■■□□□ 1.35
Pdx1P52946 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Pdx1P52946 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
Pdx1P52946 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Pdx1P52946 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.44■■□□□ 1.34
Pdx1P52946 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pdx1P52946 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pdx1P52946 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pdx1P52946 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pdx1P52946 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pdx1P52946 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pdx1P52946 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms