Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccr1l1P51676 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccr1l1P51676 Nkain2-201ENSMUST00000092602 558 ntBASIC21.68■■□□□ 1.06
Ccr1l1P51676 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccr1l1P51676 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccr1l1P51676 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.66■■□□□ 1.06
Ccr1l1P51676 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Ccr1l1P51676 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccr1l1P51676 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.64■■□□□ 1.05
Ccr1l1P51676 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Ccr1l1P51676 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccr1l1P51676 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1l1P51676 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1l1P51676 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1l1P51676 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccr1l1P51676 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1l1P51676 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1l1P51676 Gm6821-201ENSMUST00000107540 542 ntBASIC21.61■■□□□ 1.05
Ccr1l1P51676 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccr1l1P51676 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1l1P51676 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.59■■□□□ 1.05
Ccr1l1P51676 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccr1l1P51676 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ccr1l1P51676 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1l1P51676 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccr1l1P51676 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccr1l1P51676 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ccr1l1P51676 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccr1l1P51676 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
Ccr1l1P51676 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1l1P51676 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1l1P51676 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1l1P51676 Gm30023-201ENSMUST00000197970 889 ntBASIC21.56■■□□□ 1.04
Ccr1l1P51676 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.56■■□□□ 1.04
Ccr1l1P51676 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ccr1l1P51676 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ccr1l1P51676 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccr1l1P51676 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr1l1P51676 Gm8503-201ENSMUST00000118131 455 ntBASIC21.54■■□□□ 1.04
Ccr1l1P51676 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr1l1P51676 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ccr1l1P51676 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccr1l1P51676 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccr1l1P51676 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccr1l1P51676 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ccr1l1P51676 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccr1l1P51676 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr1l1P51676 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr1l1P51676 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr1l1P51676 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccr1l1P51676 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccr1l1P51676 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr1l1P51676 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr1l1P51676 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ccr1l1P51676 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccr1l1P51676 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccr1l1P51676 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccr1l1P51676 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccr1l1P51676 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.46■■□□□ 1.03
Ccr1l1P51676 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccr1l1P51676 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.45■■□□□ 1.02
Ccr1l1P51676 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.45■■□□□ 1.02
Ccr1l1P51676 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr1l1P51676 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr1l1P51676 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccr1l1P51676 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr1l1P51676 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr1l1P51676 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccr1l1P51676 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccr1l1P51676 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.42■■□□□ 1.02
Ccr1l1P51676 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccr1l1P51676 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccr1l1P51676 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ccr1l1P51676 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccr1l1P51676 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.41■■□□□ 1.02
Ccr1l1P51676 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccr1l1P51676 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccr1l1P51676 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Ccr1l1P51676 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccr1l1P51676 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccr1l1P51676 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccr1l1P51676 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccr1l1P51676 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.38■■□□□ 1.01
Ccr1l1P51676 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccr1l1P51676 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccr1l1P51676 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccr1l1P51676 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccr1l1P51676 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccr1l1P51676 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccr1l1P51676 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1l1P51676 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccr1l1P51676 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1l1P51676 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1l1P51676 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms