Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 SRP54YPR088C 1626 nt8.72□□□□□ -1.01
NMD5P46970 SPE2YOL052C 1191 nt8.71□□□□□ -1.02
NMD5P46970 YOR072WYOR072W 315 nt8.71□□□□□ -1.02
NMD5P46970 STE4YOR212W 1272 nt8.71□□□□□ -1.02
NMD5P46970 YMC2YBR104W 990 nt8.71□□□□□ -1.02
NMD5P46970 NAS2YIL007C 663 nt8.7□□□□□ -1.02
NMD5P46970 ESS1YJR017C 513 nt8.7□□□□□ -1.02
NMD5P46970 YLR072WYLR072W 2082 nt8.69□□□□□ -1.02
NMD5P46970 SRM1YGL097W 1449 nt8.68□□□□□ -1.02
NMD5P46970 EMC3YKL207W 762 nt8.67□□□□□ -1.02
NMD5P46970 REX2YLR059C 810 nt8.67□□□□□ -1.02
NMD5P46970 TUB4YLR212C 1422 nt8.67□□□□□ -1.02
NMD5P46970 MEX67YPL169C 1800 nt8.67□□□□□ -1.02
NMD5P46970 CDD1YLR245C 429 nt8.66□□□□□ -1.02
NMD5P46970 MIM1YOL026C 342 nt8.66□□□□□ -1.02
NMD5P46970 GAS1YMR307W 1680 nt8.65□□□□□ -1.02
NMD5P46970 PTC6YCR079W 1329 nt8.65□□□□□ -1.02
NMD5P46970 RAD51YER095W 1203 nt8.64□□□□□ -1.03
NMD5P46970 CPD1YGR247W 720 nt8.64□□□□□ -1.03
NMD5P46970 GSF2YML048W 1212 nt8.64□□□□□ -1.03
NMD5P46970 MRS4YKR052C 915 nt8.63□□□□□ -1.03
NMD5P46970 KRE1YNL322C 942 nt8.63□□□□□ -1.03
NMD5P46970 NME1NME1 340 nt8.63□□□□□ -1.03
NMD5P46970 HBS1YKR084C 1836 nt8.63□□□□□ -1.03
NMD5P46970 TPN1YGL186C 1740 nt8.62□□□□□ -1.03
NMD5P46970 THP3YPR045C 1413 nt8.62□□□□□ -1.03
NMD5P46970 DUR3YHL016C 2208 nt8.61□□□□□ -1.03
NMD5P46970 AAC3YBR085W 924 nt8.61□□□□□ -1.03
NMD5P46970 GTB1YDR221W 2109 nt8.6□□□□□ -1.03
NMD5P46970 snR86snR86 1004 nt8.6□□□□□ -1.03
NMD5P46970 FTH1YBR207W 1398 nt8.6□□□□□ -1.03
NMD5P46970 YKR012CYKR012C 378 nt8.59□□□□□ -1.03
NMD5P46970 ABP1YCR088W 1779 nt8.56□□□□□ -1.04
NMD5P46970 ADH7YCR105W 1086 nt8.56□□□□□ -1.04
NMD5P46970 ESBP6YNL125C 2022 nt8.56□□□□□ -1.04
NMD5P46970 PAU5YFL020C 369 nt8.55□□□□□ -1.04
NMD5P46970 PHB2YGR231C 933 nt8.55□□□□□ -1.04
NMD5P46970 SDS24YBR214W 1584 nt8.54□□□□□ -1.04
NMD5P46970 VBA3YCL069W 1377 nt8.54□□□□□ -1.04
NMD5P46970 ADH3YMR083W 1128 nt8.54□□□□□ -1.04
NMD5P46970 FSH2YMR222C 672 nt8.54□□□□□ -1.04
NMD5P46970 ORT1YOR130C 879 nt8.54□□□□□ -1.04
NMD5P46970 YMR210WYMR210W 1350 nt8.53□□□□□ -1.04
NMD5P46970 YPT11YNL304W 1254 nt8.53□□□□□ -1.04
NMD5P46970 snR4snR4 186 nt8.53□□□□□ -1.04
NMD5P46970 ILV2YMR108W 2064 nt8.53□□□□□ -1.04
NMD5P46970 TMS1YDR105C 1422 nt8.53□□□□□ -1.04
NMD5P46970 MEP1YGR121C 1479 nt8.52□□□□□ -1.05
NMD5P46970 MDL2YPL270W 2322 nt8.52□□□□□ -1.05
NMD5P46970 PAU15YIR041W 375 nt8.52□□□□□ -1.05
NMD5P46970 PGC1YPL206C 966 nt8.52□□□□□ -1.05
NMD5P46970 LEA1YPL213W 717 nt8.51□□□□□ -1.05
NMD5P46970 IGD1YFR017C 588 nt8.5□□□□□ -1.05
NMD5P46970 DUS3YLR401C 2007 nt8.5□□□□□ -1.05
NMD5P46970 YJL009WYJL009W 327 nt8.49□□□□□ -1.05
NMD5P46970 YBR056WYBR056W 1506 nt8.49□□□□□ -1.05
NMD5P46970 YJR149WYJR149W 1215 nt8.47□□□□□ -1.05
NMD5P46970 HIS3YOR202W 663 nt8.46□□□□□ -1.06
NMD5P46970 LYS20YDL182W 1287 nt8.45□□□□□ -1.06
NMD5P46970 MOB1YIL106W 945 nt8.45□□□□□ -1.06
NMD5P46970 PAR32YDL173W 888 nt8.44□□□□□ -1.06
NMD5P46970 RFC1YOR217W 2586 nt8.43□□□□□ -1.06
NMD5P46970 RSM7YJR113C 744 nt8.43□□□□□ -1.06
NMD5P46970 STP3YLR375W 1032 nt8.43□□□□□ -1.06
NMD5P46970 YFR020WYFR020W 699 nt8.42□□□□□ -1.06
NMD5P46970 ENO1YGR254W 1314 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)DtA(AGC)D 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)FtA(AGC)F 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)GtA(AGC)G 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)HtA(AGC)H 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)JtA(AGC)J 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)K1tA(AGC)K1 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)K2tA(AGC)K2 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)LtA(AGC)L 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)M1tA(AGC)M1 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)M2tA(AGC)M2 73 nt8.4□□□□□ -1.06
NMD5P46970 tA(AGC)PtA(AGC)P 73 nt8.4□□□□□ -1.06
NMD5P46970 FLX1YIL134W 936 nt8.4□□□□□ -1.06
NMD5P46970 BUB2YMR055C 921 nt8.4□□□□□ -1.06
NMD5P46970 GAL2YLR081W 1725 nt8.4□□□□□ -1.07
NMD5P46970 YDR510C-AYDR510C-A 117 nt8.38□□□□□ -1.07
NMD5P46970 tS(GCU)LtS(GCU)L 80 nt8.38□□□□□ -1.07
NMD5P46970 YBR232CYBR232C 360 nt8.38□□□□□ -1.07
NMD5P46970 INO1YJL153C 1602 nt8.38□□□□□ -1.07
NMD5P46970 DTR1YBR180W 1719 nt8.37□□□□□ -1.07
NMD5P46970 POP2YNR052C 1302 nt8.37□□□□□ -1.07
NMD5P46970 YIR035CYIR035C 765 nt8.37□□□□□ -1.07
NMD5P46970 MRN1YPL184C 1839 nt8.36□□□□□ -1.07
NMD5P46970 DIA4YHR011W 1341 nt8.36□□□□□ -1.07
NMD5P46970 FIT1YDR534C 1587 nt8.35□□□□□ -1.07
NMD5P46970 RNA170RNA170 169 nt8.35□□□□□ -1.07
NMD5P46970 IPL1YPL209C 1104 nt8.35□□□□□ -1.07
NMD5P46970 LRO1YNR008W 1986 nt8.35□□□□□ -1.07
NMD5P46970 TOK1YJL093C 2076 nt8.34□□□□□ -1.07
NMD5P46970 ADE16YLR028C 1776 nt8.34□□□□□ -1.07
NMD5P46970 BUD31YCR063W 474 nt8.33□□□□□ -1.08
NMD5P46970 YLR280CYLR280C 351 nt8.33□□□□□ -1.08
NMD5P46970 DIP5YPL265W 1827 nt8.33□□□□□ -1.08
NMD5P46970 YGR139WYGR139W 339 nt8.32□□□□□ -1.08
NMD5P46970 UFD1YGR048W 1086 nt8.31□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 9.2 ms