Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Timp3P39876 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Timp3P39876 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Timp3P39876 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Timp3P39876 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Timp3P39876 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Timp3P39876 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Timp3P39876 Gm7432-201ENSMUST00000210343 879 ntBASIC19.45■□□□□ 0.7
Timp3P39876 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timp3P39876 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Timp3P39876 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Timp3P39876 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Timp3P39876 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Timp3P39876 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Timp3P39876 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Timp3P39876 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.4■□□□□ 0.7
Timp3P39876 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timp3P39876 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Timp3P39876 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Timp3P39876 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.39■□□□□ 0.69
Timp3P39876 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Timp3P39876 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timp3P39876 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Timp3P39876 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timp3P39876 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Timp3P39876 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Timp3P39876 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Timp3P39876 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Timp3P39876 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Timp3P39876 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
Timp3P39876 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.34■□□□□ 0.69
Timp3P39876 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Timp3P39876 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Timp3P39876 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Timp3P39876 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Timp3P39876 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Timp3P39876 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Timp3P39876 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.31■□□□□ 0.68
Timp3P39876 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.31■□□□□ 0.68
Timp3P39876 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Timp3P39876 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Timp3P39876 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Timp3P39876 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.3■□□□□ 0.68
Timp3P39876 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Timp3P39876 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Timp3P39876 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.3■□□□□ 0.68
Timp3P39876 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Timp3P39876 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Timp3P39876 Gm11599-201ENSMUST00000118720 878 ntBASIC19.29■□□□□ 0.68
Timp3P39876 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Timp3P39876 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Timp3P39876 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.28■□□□□ 0.68
Timp3P39876 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Timp3P39876 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.28■□□□□ 0.68
Timp3P39876 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Timp3P39876 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.28■□□□□ 0.68
Timp3P39876 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Timp3P39876 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Timp3P39876 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Timp3P39876 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Timp3P39876 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Timp3P39876 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timp3P39876 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timp3P39876 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timp3P39876 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timp3P39876 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Timp3P39876 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Timp3P39876 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Timp3P39876 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Timp3P39876 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Timp3P39876 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Timp3P39876 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.25■□□□□ 0.67
Timp3P39876 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.24■□□□□ 0.67
Timp3P39876 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Timp3P39876 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.24■□□□□ 0.67
Timp3P39876 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Timp3P39876 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Timp3P39876 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
Timp3P39876 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.22■□□□□ 0.67
Timp3P39876 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timp3P39876 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.21■□□□□ 0.67
Timp3P39876 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Timp3P39876 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Timp3P39876 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Timp3P39876 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp3P39876 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.2■□□□□ 0.66
Timp3P39876 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp3P39876 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Timp3P39876 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Timp3P39876 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.18■□□□□ 0.66
Timp3P39876 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timp3P39876 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timp3P39876 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp3P39876 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Timp3P39876 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Timp3P39876 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Timp3P39876 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp3P39876 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp3P39876 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timp3P39876 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms