Protein–RNA interactions for Protein: P38329

VHC1, Vacuolar cation-chloride cotransporter 1, yeastyeast

Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHC1P38329 tD(GUC)I1tD(GUC)I1 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)I2tD(GUC)I2 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)J1tD(GUC)J1 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)J2tD(GUC)J2 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)J3tD(GUC)J3 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)J4tD(GUC)J4 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)KtD(GUC)K 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)L1tD(GUC)L1 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)L2tD(GUC)L2 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)MtD(GUC)M 72 nt8.6□□□□□ -1.03
VHC1P38329 tD(GUC)OtD(GUC)O 72 nt8.6□□□□□ -1.03
VHC1P38329 HXT11YOL156W 1704 nt8.6□□□□□ -1.03
VHC1P38329 SFP1YLR403W 2052 nt8.59□□□□□ -1.03
VHC1P38329 PAU5YFL020C 369 nt8.59□□□□□ -1.03
VHC1P38329 PAU15YIR041W 375 nt8.59□□□□□ -1.03
VHC1P38329 ESS1YJR017C 513 nt8.59□□□□□ -1.03
VHC1P38329 YOR072WYOR072W 315 nt8.59□□□□□ -1.03
VHC1P38329 NPP1YCR026C 2229 nt8.58□□□□□ -1.04
VHC1P38329 MRS4YKR052C 915 nt8.58□□□□□ -1.04
VHC1P38329 AAC3YBR085W 924 nt8.58□□□□□ -1.04
VHC1P38329 EMC3YKL207W 762 nt8.57□□□□□ -1.04
VHC1P38329 YKR012CYKR012C 378 nt8.57□□□□□ -1.04
VHC1P38329 YPT11YNL304W 1254 nt8.57□□□□□ -1.04
VHC1P38329 PGC1YPL206C 966 nt8.56□□□□□ -1.04
VHC1P38329 HMG2YLR450W 3138 nt8.56□□□□□ -1.04
VHC1P38329 YLR072WYLR072W 2082 nt8.55□□□□□ -1.04
VHC1P38329 MIM1YOL026C 342 nt8.55□□□□□ -1.04
VHC1P38329 TPN1YGL186C 1740 nt8.54□□□□□ -1.04
VHC1P38329 SDS24YBR214W 1584 nt8.54□□□□□ -1.04
VHC1P38329 SRM1YGL097W 1449 nt8.54□□□□□ -1.04
VHC1P38329 VBA3YCL069W 1377 nt8.53□□□□□ -1.04
VHC1P38329 IGD1YFR017C 588 nt8.53□□□□□ -1.04
VHC1P38329 PHB2YGR231C 933 nt8.53□□□□□ -1.04
VHC1P38329 STP3YLR375W 1032 nt8.53□□□□□ -1.04
VHC1P38329 HBS1YKR084C 1836 nt8.52□□□□□ -1.04
VHC1P38329 ADH3YMR083W 1128 nt8.52□□□□□ -1.05
VHC1P38329 snR86snR86 1004 nt8.51□□□□□ -1.05
VHC1P38329 TMS1YDR105C 1422 nt8.51□□□□□ -1.05
VHC1P38329 PAR32YDL173W 888 nt8.5□□□□□ -1.05
VHC1P38329 MEX67YPL169C 1800 nt8.5□□□□□ -1.05
VHC1P38329 YMR210WYMR210W 1350 nt8.48□□□□□ -1.05
VHC1P38329 LYS20YDL182W 1287 nt8.47□□□□□ -1.05
VHC1P38329 YBR232CYBR232C 360 nt8.47□□□□□ -1.05
VHC1P38329 DUR3YHL016C 2208 nt8.47□□□□□ -1.05
VHC1P38329 tS(GCU)LtS(GCU)L 80 nt8.46□□□□□ -1.06
VHC1P38329 ORT1YOR130C 879 nt8.46□□□□□ -1.06
VHC1P38329 RSM7YJR113C 744 nt8.45□□□□□ -1.06
VHC1P38329 MOB1YIL106W 945 nt8.44□□□□□ -1.06
VHC1P38329 YJL009WYJL009W 327 nt8.44□□□□□ -1.06
VHC1P38329 LEA1YPL213W 717 nt8.44□□□□□ -1.06
VHC1P38329 ENO1YGR254W 1314 nt8.44□□□□□ -1.06
VHC1P38329 FTH1YBR207W 1398 nt8.44□□□□□ -1.06
VHC1P38329 ESBP6YNL125C 2022 nt8.44□□□□□ -1.06
VHC1P38329 YBR056WYBR056W 1506 nt8.44□□□□□ -1.06
VHC1P38329 YFR020WYFR020W 699 nt8.43□□□□□ -1.06
VHC1P38329 ABP1YCR088W 1779 nt8.43□□□□□ -1.06
VHC1P38329 tA(AGC)DtA(AGC)D 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)FtA(AGC)F 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)GtA(AGC)G 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)HtA(AGC)H 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)JtA(AGC)J 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)K1tA(AGC)K1 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)K2tA(AGC)K2 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)LtA(AGC)L 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)M1tA(AGC)M1 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)M2tA(AGC)M2 73 nt8.42□□□□□ -1.06
VHC1P38329 tA(AGC)PtA(AGC)P 73 nt8.42□□□□□ -1.06
VHC1P38329 FLX1YIL134W 936 nt8.42□□□□□ -1.06
VHC1P38329 MEP1YGR121C 1479 nt8.41□□□□□ -1.06
VHC1P38329 YJR149WYJR149W 1215 nt8.41□□□□□ -1.06
VHC1P38329 YIR035CYIR035C 765 nt8.4□□□□□ -1.06
VHC1P38329 HIS3YOR202W 663 nt8.4□□□□□ -1.06
VHC1P38329 RFC1YOR217W 2586 nt8.4□□□□□ -1.07
VHC1P38329 BUB2YMR055C 921 nt8.39□□□□□ -1.07
VHC1P38329 IPL1YPL209C 1104 nt8.39□□□□□ -1.07
VHC1P38329 snR4snR4 186 nt8.38□□□□□ -1.07
VHC1P38329 CYC3YAL039C 810 nt8.34□□□□□ -1.07
VHC1P38329 BSP1YPR171W 1731 nt8.34□□□□□ -1.07
VHC1P38329 SRP102YKL154W 735 nt8.33□□□□□ -1.08
VHC1P38329 YLR280CYLR280C 351 nt8.33□□□□□ -1.08
VHC1P38329 RNA170RNA170 169 nt8.32□□□□□ -1.08
VHC1P38329 YRF1-3YGR296W 5580 nt8.32□□□□□ -1.08
VHC1P38329 YRF1-6YNL339C 5580 nt8.32□□□□□ -1.08
VHC1P38329 YRF1-7YPL283C 5580 nt8.32□□□□□ -1.08
VHC1P38329 ILV2YMR108W 2064 nt8.31□□□□□ -1.08
VHC1P38329 DUS3YLR401C 2007 nt8.31□□□□□ -1.08
VHC1P38329 YLR460CYLR460C 1131 nt8.31□□□□□ -1.08
VHC1P38329 MDL2YPL270W 2322 nt8.31□□□□□ -1.08
VHC1P38329 MET22YOL064C 1074 nt8.3□□□□□ -1.08
VHC1P38329 ERO1YML130C 1692 nt8.3□□□□□ -1.08
VHC1P38329 DIA4YHR011W 1341 nt8.29□□□□□ -1.08
VHC1P38329 BUD31YCR063W 474 nt8.29□□□□□ -1.08
VHC1P38329 INO1YJL153C 1602 nt8.29□□□□□ -1.08
VHC1P38329 CHS7YHR142W 951 nt8.28□□□□□ -1.08
VHC1P38329 YCR025CYCR025C 411 nt8.27□□□□□ -1.09
VHC1P38329 LRO1YNR008W 1986 nt8.27□□□□□ -1.09
VHC1P38329 YIL177CYIL177C 5277 nt8.27□□□□□ -1.09
VHC1P38329 TIF3YPR163C 1311 nt8.27□□□□□ -1.09
VHC1P38329 EHT1YBR177C 1356 nt8.26□□□□□ -1.09
VHC1P38329 GLY1YEL046C 1164 nt8.26□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms