Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NdnP25233 Gm25262-201ENSMUST00000174934 133 ntBASIC19.01■□□□□ 0.63
NdnP25233 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NdnP25233 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.01■□□□□ 0.63
NdnP25233 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NdnP25233 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19■□□□□ 0.63
NdnP25233 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NdnP25233 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NdnP25233 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
NdnP25233 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NdnP25233 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NdnP25233 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NdnP25233 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NdnP25233 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NdnP25233 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NdnP25233 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NdnP25233 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NdnP25233 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NdnP25233 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NdnP25233 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.97■□□□□ 0.63
NdnP25233 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NdnP25233 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NdnP25233 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NdnP25233 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NdnP25233 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NdnP25233 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NdnP25233 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NdnP25233 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NdnP25233 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NdnP25233 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NdnP25233 Mipep-204ENSMUST00000225043 1548 ntBASIC18.94■□□□□ 0.62
NdnP25233 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NdnP25233 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NdnP25233 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NdnP25233 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.92■□□□□ 0.62
NdnP25233 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NdnP25233 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.92■□□□□ 0.62
NdnP25233 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NdnP25233 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NdnP25233 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NdnP25233 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
NdnP25233 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
NdnP25233 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NdnP25233 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NdnP25233 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NdnP25233 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NdnP25233 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NdnP25233 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NdnP25233 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NdnP25233 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NdnP25233 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.88■□□□□ 0.61
NdnP25233 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NdnP25233 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NdnP25233 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NdnP25233 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NdnP25233 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NdnP25233 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NdnP25233 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NdnP25233 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NdnP25233 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NdnP25233 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NdnP25233 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NdnP25233 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NdnP25233 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NdnP25233 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NdnP25233 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NdnP25233 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NdnP25233 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NdnP25233 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NdnP25233 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NdnP25233 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NdnP25233 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NdnP25233 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NdnP25233 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
NdnP25233 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NdnP25233 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NdnP25233 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NdnP25233 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NdnP25233 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NdnP25233 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NdnP25233 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.8■□□□□ 0.6
NdnP25233 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NdnP25233 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NdnP25233 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NdnP25233 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.79■□□□□ 0.6
NdnP25233 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NdnP25233 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NdnP25233 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NdnP25233 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NdnP25233 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NdnP25233 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NdnP25233 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NdnP25233 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NdnP25233 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NdnP25233 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NdnP25233 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NdnP25233 Notumos-201ENSMUST00000151998 2659 ntBASIC18.76■□□□□ 0.59
NdnP25233 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NdnP25233 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NdnP25233 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms