Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf1aP25118 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tnfrsf1aP25118 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.86■□□□□ 0.77
Tnfrsf1aP25118 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf1aP25118 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf1aP25118 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf1aP25118 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf1aP25118 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf1aP25118 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf1aP25118 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf1aP25118 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf1aP25118 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.83■□□□□ 0.77
Tnfrsf1aP25118 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.83■□□□□ 0.76
Tnfrsf1aP25118 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfrsf1aP25118 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Tnfrsf1aP25118 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf1aP25118 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf1aP25118 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.81■□□□□ 0.76
Tnfrsf1aP25118 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.81■□□□□ 0.76
Tnfrsf1aP25118 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf1aP25118 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf1aP25118 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf1aP25118 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf1aP25118 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf1aP25118 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf1aP25118 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfrsf1aP25118 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf1aP25118 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf1aP25118 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf1aP25118 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf1aP25118 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf1aP25118 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf1aP25118 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf1aP25118 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1aP25118 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1aP25118 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1aP25118 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf1aP25118 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1aP25118 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1aP25118 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf1aP25118 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf1aP25118 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1aP25118 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1aP25118 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1aP25118 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Tnfrsf1aP25118 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1aP25118 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1aP25118 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1aP25118 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1aP25118 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1aP25118 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1aP25118 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1aP25118 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf1aP25118 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1aP25118 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1aP25118 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1aP25118 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1aP25118 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Tnfrsf1aP25118 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf1aP25118 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf1aP25118 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tnfrsf1aP25118 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf1aP25118 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tnfrsf1aP25118 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Tnfrsf1aP25118 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf1aP25118 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf1aP25118 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf1aP25118 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf1aP25118 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1aP25118 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tnfrsf1aP25118 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1aP25118 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1aP25118 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
Tnfrsf1aP25118 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1aP25118 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1aP25118 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1aP25118 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1aP25118 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1aP25118 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1aP25118 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf1aP25118 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf1aP25118 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfrsf1aP25118 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf1aP25118 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Tnfrsf1aP25118 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf1aP25118 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1aP25118 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1aP25118 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1aP25118 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1aP25118 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf1aP25118 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf1aP25118 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf1aP25118 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf1aP25118 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms