Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P20040 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P20040 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.02■□□□□ 0.96
P20040 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
P20040 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P20040 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
P20040 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
P20040 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21■□□□□ 0.95
P20040 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P20040 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
P20040 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P20040 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P20040 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
P20040 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
P20040 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P20040 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
P20040 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P20040 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P20040 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
P20040 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.96■□□□□ 0.95
P20040 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.96■□□□□ 0.95
P20040 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P20040 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P20040 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P20040 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
P20040 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P20040 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
P20040 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P20040 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P20040 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P20040 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.92■□□□□ 0.94
P20040 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
P20040 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P20040 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P20040 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.9■□□□□ 0.94
P20040 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P20040 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P20040 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P20040 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
P20040 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P20040 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
P20040 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.89■□□□□ 0.93
P20040 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P20040 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.87■□□□□ 0.93
P20040 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
P20040 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P20040 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P20040 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P20040 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.83■□□□□ 0.93
P20040 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
P20040 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P20040 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P20040 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
P20040 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.82■□□□□ 0.92
P20040 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.82■□□□□ 0.92
P20040 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P20040 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.81■□□□□ 0.92
P20040 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P20040 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
P20040 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
P20040 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P20040 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P20040 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P20040 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P20040 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.79■□□□□ 0.92
P20040 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
P20040 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
P20040 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P20040 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P20040 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P20040 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P20040 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
P20040 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P20040 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P20040 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P20040 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
P20040 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
P20040 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P20040 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P20040 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P20040 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms