Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P20040 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P20040 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.02■□□□□ 0.96
P20040 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
P20040 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P20040 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
P20040 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
P20040 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21■□□□□ 0.95
P20040 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P20040 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
P20040 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P20040 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P20040 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
P20040 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
P20040 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P20040 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
P20040 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P20040 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P20040 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
P20040 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.96■□□□□ 0.95
P20040 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.96■□□□□ 0.95
P20040 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P20040 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P20040 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P20040 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P20040 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
P20040 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P20040 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
P20040 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P20040 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P20040 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P20040 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P20040 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.92■□□□□ 0.94
P20040 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
P20040 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P20040 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P20040 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.9■□□□□ 0.94
P20040 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P20040 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P20040 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P20040 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
P20040 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P20040 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
P20040 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.89■□□□□ 0.93
P20040 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P20040 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.87■□□□□ 0.93
P20040 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
P20040 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P20040 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P20040 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P20040 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.83■□□□□ 0.93
P20040 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
P20040 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P20040 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P20040 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
P20040 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.82■□□□□ 0.92
P20040 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.82■□□□□ 0.92
P20040 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P20040 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.81■□□□□ 0.92
P20040 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P20040 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
P20040 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
P20040 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P20040 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P20040 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P20040 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P20040 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.79■□□□□ 0.92
P20040 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
P20040 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
P20040 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P20040 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P20040 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P20040 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P20040 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P20040 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
P20040 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P20040 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P20040 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P20040 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
P20040 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
P20040 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P20040 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P20040 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P20040 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P20040 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms