Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NeflP08551 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NeflP08551 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC30.88■■■□□ 2.53
NeflP08551 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
NeflP08551 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NeflP08551 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.87■■■□□ 2.53
NeflP08551 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
NeflP08551 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
NeflP08551 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
NeflP08551 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.83■■■□□ 2.53
NeflP08551 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NeflP08551 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
NeflP08551 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NeflP08551 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
NeflP08551 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
NeflP08551 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NeflP08551 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
NeflP08551 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NeflP08551 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.81■■■□□ 2.52
NeflP08551 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NeflP08551 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NeflP08551 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NeflP08551 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NeflP08551 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NeflP08551 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NeflP08551 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NeflP08551 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NeflP08551 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NeflP08551 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
NeflP08551 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
NeflP08551 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
NeflP08551 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NeflP08551 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
NeflP08551 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NeflP08551 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NeflP08551 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
NeflP08551 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
NeflP08551 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NeflP08551 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
NeflP08551 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NeflP08551 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NeflP08551 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NeflP08551 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NeflP08551 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
NeflP08551 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
NeflP08551 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.67■■■□□ 2.5
NeflP08551 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
NeflP08551 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NeflP08551 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NeflP08551 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.65■■■□□ 2.5
NeflP08551 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NeflP08551 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NeflP08551 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC30.63■■■□□ 2.49
NeflP08551 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.63■■■□□ 2.49
NeflP08551 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
NeflP08551 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NeflP08551 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NeflP08551 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NeflP08551 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NeflP08551 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NeflP08551 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
NeflP08551 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NeflP08551 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
NeflP08551 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NeflP08551 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NeflP08551 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
NeflP08551 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
NeflP08551 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
NeflP08551 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NeflP08551 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
NeflP08551 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
NeflP08551 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
NeflP08551 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
NeflP08551 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NeflP08551 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
NeflP08551 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
NeflP08551 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NeflP08551 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.49■■■□□ 2.47
NeflP08551 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
NeflP08551 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NeflP08551 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NeflP08551 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
NeflP08551 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NeflP08551 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NeflP08551 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
NeflP08551 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NeflP08551 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NeflP08551 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NeflP08551 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NeflP08551 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NeflP08551 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
NeflP08551 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
NeflP08551 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NeflP08551 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms