Protein–RNA interactions for Protein: P06701

SIR3, Regulatory protein SIR3, yeastyeast

Predictions only

Length 978 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR3P06701 tD(GUC)J2tD(GUC)J2 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)J3tD(GUC)J3 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)J4tD(GUC)J4 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)KtD(GUC)K 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)L1tD(GUC)L1 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)L2tD(GUC)L2 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)MtD(GUC)M 72 nt7.91□□□□□ -1.14
SIR3P06701 tD(GUC)OtD(GUC)O 72 nt7.91□□□□□ -1.14
SIR3P06701 YDR467CYDR467C 327 nt7.91□□□□□ -1.14
SIR3P06701 RPN14YGL004C 1254 nt7.9□□□□□ -1.14
SIR3P06701 FUN14YAL008W 597 nt7.9□□□□□ -1.14
SIR3P06701 ABZ2YMR289W 1125 nt7.9□□□□□ -1.14
SIR3P06701 YNL190WYNL190W 615 nt7.9□□□□□ -1.14
SIR3P06701 REG2YBR050C 1017 nt7.9□□□□□ -1.14
SIR3P06701 YKL053WYKL053W 375 nt7.89□□□□□ -1.15
SIR3P06701 ECM10YEL030W 1935 nt7.88□□□□□ -1.15
SIR3P06701 YDR510C-AYDR510C-A 117 nt7.88□□□□□ -1.15
SIR3P06701 ARA2YMR041C 1008 nt7.88□□□□□ -1.15
SIR3P06701 KGD2YDR148C 1392 nt7.87□□□□□ -1.15
SIR3P06701 YEL008WYEL008W 381 nt7.87□□□□□ -1.15
SIR3P06701 MHF1YOL086W-A 273 nt7.87□□□□□ -1.15
SIR3P06701 snR31snR31 225 nt7.86□□□□□ -1.15
SIR3P06701 AMF1YOR378W 1548 nt7.86□□□□□ -1.15
SIR3P06701 HBS1YKR084C 1836 nt7.85□□□□□ -1.15
SIR3P06701 MCM5YLR274W 2328 nt7.85□□□□□ -1.15
SIR3P06701 SAN1YDR143C 1833 nt7.84□□□□□ -1.15
SIR3P06701 HXT11YOL156W 1704 nt7.83□□□□□ -1.16
SIR3P06701 ADE2YOR128C 1716 nt7.83□□□□□ -1.16
SIR3P06701 TRP2YER090W 1524 nt7.83□□□□□ -1.16
SIR3P06701 THI3YDL080C 1830 nt7.83□□□□□ -1.16
SIR3P06701 GPM1YKL152C 744 nt7.83□□□□□ -1.16
SIR3P06701 YIL177CYIL177C 5277 nt7.83□□□□□ -1.16
SIR3P06701 URH1YDR400W 1023 nt7.82□□□□□ -1.16
SIR3P06701 ENO2YHR174W 1314 nt7.81□□□□□ -1.16
SIR3P06701 NIF3YGL221C 867 nt7.81□□□□□ -1.16
SIR3P06701 TPC1YGR096W 945 nt7.81□□□□□ -1.16
SIR3P06701 YLR122CYLR122C 378 nt7.81□□□□□ -1.16
SIR3P06701 YBL095WYBL095W 813 nt7.81□□□□□ -1.16
SIR3P06701 POT1YIL160C 1254 nt7.8□□□□□ -1.16
SIR3P06701 APS2YJR058C 444 nt7.8□□□□□ -1.16
SIR3P06701 LAS17YOR181W 1902 nt7.8□□□□□ -1.16
SIR3P06701 ADE5,7YGL234W 2409 nt7.79□□□□□ -1.16
SIR3P06701 PAM17YKR065C 594 nt7.79□□□□□ -1.16
SIR3P06701 YMR316C-BYMR316C-B 309 nt7.79□□□□□ -1.16
SIR3P06701 MAM3YOL060C 2121 nt7.79□□□□□ -1.16
SIR3P06701 YRF1-3YGR296W 5580 nt7.78□□□□□ -1.16
SIR3P06701 YRF1-6YNL339C 5580 nt7.78□□□□□ -1.16
SIR3P06701 YRF1-7YPL283C 5580 nt7.78□□□□□ -1.16
SIR3P06701 AI5_BETAQ0075 1065 nt7.78□□□□□ -1.16
SIR3P06701 LCP5YER127W 1074 nt7.78□□□□□ -1.16
SIR3P06701 TAF13YML098W 504 nt7.78□□□□□ -1.16
SIR3P06701 SNU66YOR308C 1764 nt7.77□□□□□ -1.17
SIR3P06701 NDE1YMR145C 1683 nt7.77□□□□□ -1.17
SIR3P06701 CDD1YLR245C 429 nt7.77□□□□□ -1.17
SIR3P06701 YLR349WYLR349W 507 nt7.77□□□□□ -1.17
SIR3P06701 FRT1YOR324C 1809 nt7.77□□□□□ -1.17
SIR3P06701 SRM1YGL097W 1449 nt7.77□□□□□ -1.17
SIR3P06701 NAM8YHR086W 1572 nt7.76□□□□□ -1.17
SIR3P06701 AAT1YKL106W 1356 nt7.76□□□□□ -1.17
SIR3P06701 ORT1YOR130C 879 nt7.76□□□□□ -1.17
SIR3P06701 GGA2YHR108W 1758 nt7.75□□□□□ -1.17
SIR3P06701 COG1YGL223C 1254 nt7.75□□□□□ -1.17
SIR3P06701 SBP1YHL034C 885 nt7.75□□□□□ -1.17
SIR3P06701 NAS2YIL007C 663 nt7.75□□□□□ -1.17
SIR3P06701 DUS3YLR401C 2007 nt7.74□□□□□ -1.17
SIR3P06701 YLR072WYLR072W 2082 nt7.74□□□□□ -1.17
SIR3P06701 TOM20YGR082W 552 nt7.74□□□□□ -1.17
SIR3P06701 STE4YOR212W 1272 nt7.74□□□□□ -1.17
SIR3P06701 POP2YNR052C 1302 nt7.74□□□□□ -1.17
SIR3P06701 BEM1YBR200W 1656 nt7.73□□□□□ -1.17
SIR3P06701 TUB4YLR212C 1422 nt7.73□□□□□ -1.17
SIR3P06701 EMC3YKL207W 762 nt7.73□□□□□ -1.17
SIR3P06701 LEU2YCL018W 1095 nt7.73□□□□□ -1.17
SIR3P06701 SRP54YPR088C 1626 nt7.73□□□□□ -1.17
SIR3P06701 RAD51YER095W 1203 nt7.72□□□□□ -1.17
SIR3P06701 YPL041CYPL041C 624 nt7.72□□□□□ -1.17
SIR3P06701 YMC2YBR104W 990 nt7.72□□□□□ -1.17
SIR3P06701 GGC1YDL198C 903 nt7.71□□□□□ -1.18
SIR3P06701 REX2YLR059C 810 nt7.71□□□□□ -1.18
SIR3P06701 ADE16YLR028C 1776 nt7.71□□□□□ -1.18
SIR3P06701 ESS1YJR017C 513 nt7.7□□□□□ -1.18
SIR3P06701 GSF2YML048W 1212 nt7.69□□□□□ -1.18
SIR3P06701 SPE2YOL052C 1191 nt7.69□□□□□ -1.18
SIR3P06701 snR4snR4 186 nt7.69□□□□□ -1.18
SIR3P06701 YMR210WYMR210W 1350 nt7.69□□□□□ -1.18
SIR3P06701 FTH1YBR207W 1398 nt7.69□□□□□ -1.18
SIR3P06701 CPD1YGR247W 720 nt7.68□□□□□ -1.18
SIR3P06701 CTF3YLR381W 2202 nt7.68□□□□□ -1.18
SIR3P06701 PMA2YPL036W 2844 nt7.68□□□□□ -1.18
SIR3P06701 GAS1YMR307W 1680 nt7.67□□□□□ -1.18
SIR3P06701 AAC3YBR085W 924 nt7.67□□□□□ -1.18
SIR3P06701 THP3YPR045C 1413 nt7.67□□□□□ -1.18
SIR3P06701 PTC6YCR079W 1329 nt7.66□□□□□ -1.18
SIR3P06701 MRS4YKR052C 915 nt7.65□□□□□ -1.18
SIR3P06701 MAS1YLR163C 1389 nt7.65□□□□□ -1.18
SIR3P06701 snR86snR86 1004 nt7.64□□□□□ -1.19
SIR3P06701 LEA1YPL213W 717 nt7.62□□□□□ -1.19
SIR3P06701 YTH1YPR107C 627 nt7.62□□□□□ -1.19
SIR3P06701 GNP1YDR508C 1992 nt7.62□□□□□ -1.19
SIR3P06701 PFS2YNL317W 1398 nt7.61□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 247 ms