Protein–RNA interactions for Protein: P04942

Ig kappa chain V-VI region NQ5-61.1.2, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04942 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04942 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04942 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04942 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04942 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04942 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
P04942 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P04942 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.33■□□□□ 0.68
P04942 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
P04942 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04942 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04942 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.31■□□□□ 0.68
P04942 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
P04942 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04942 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04942 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04942 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04942 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04942 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04942 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04942 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04942 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04942 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04942 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04942 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
P04942 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04942 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.27■□□□□ 0.68
P04942 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04942 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04942 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P04942 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04942 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04942 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P04942 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
P04942 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04942 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
P04942 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.25■□□□□ 0.67
P04942 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04942 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04942 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.24■□□□□ 0.67
P04942 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.24■□□□□ 0.67
P04942 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P04942 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04942 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04942 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04942 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P04942 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
P04942 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P04942 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04942 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04942 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P04942 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.21■□□□□ 0.67
P04942 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04942 Gm30023-201ENSMUST00000197970 889 ntBASIC19.2■□□□□ 0.66
P04942 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.19■□□□□ 0.66
P04942 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04942 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P04942 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
P04942 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04942 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P04942 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.18■□□□□ 0.66
P04942 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P04942 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
P04942 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
P04942 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
P04942 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04942 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04942 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04942 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04942 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
P04942 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P04942 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04942 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04942 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P04942 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P04942 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P04942 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P04942 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04942 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
P04942 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.13■□□□□ 0.65
P04942 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P04942 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
P04942 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04942 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04942 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04942 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.12■□□□□ 0.65
P04942 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04942 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P04942 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P04942 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04942 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04942 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
P04942 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04942 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.1■□□□□ 0.65
P04942 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.1■□□□□ 0.65
P04942 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P04942 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
P04942 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
P04942 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P04942 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms