Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd74P04441 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.8■□□□□ 0.76
Cd74P04441 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd74P04441 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cd74P04441 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd74P04441 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.78■□□□□ 0.76
Cd74P04441 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cd74P04441 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.77■□□□□ 0.76
Cd74P04441 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd74P04441 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cd74P04441 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cd74P04441 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.76■□□□□ 0.75
Cd74P04441 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd74P04441 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd74P04441 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd74P04441 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd74P04441 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cd74P04441 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd74P04441 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd74P04441 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.73■□□□□ 0.75
Cd74P04441 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd74P04441 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd74P04441 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd74P04441 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd74P04441 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd74P04441 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd74P04441 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd74P04441 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd74P04441 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd74P04441 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.71■□□□□ 0.75
Cd74P04441 Nkain2-201ENSMUST00000092602 558 ntBASIC19.71■□□□□ 0.75
Cd74P04441 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd74P04441 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd74P04441 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cd74P04441 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.7■□□□□ 0.74
Cd74P04441 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd74P04441 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd74P04441 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd74P04441 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cd74P04441 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd74P04441 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cd74P04441 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.68■□□□□ 0.74
Cd74P04441 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd74P04441 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cd74P04441 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd74P04441 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd74P04441 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cd74P04441 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd74P04441 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cd74P04441 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd74P04441 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd74P04441 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd74P04441 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd74P04441 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd74P04441 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.64■□□□□ 0.73
Cd74P04441 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.64■□□□□ 0.73
Cd74P04441 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.64■□□□□ 0.73
Cd74P04441 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd74P04441 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cd74P04441 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd74P04441 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cd74P04441 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd74P04441 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd74P04441 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd74P04441 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd74P04441 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cd74P04441 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Cd74P04441 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd74P04441 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd74P04441 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd74P04441 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd74P04441 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd74P04441 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd74P04441 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd74P04441 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cd74P04441 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.59■□□□□ 0.73
Cd74P04441 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.59■□□□□ 0.73
Cd74P04441 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cd74P04441 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cd74P04441 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd74P04441 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd74P04441 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd74P04441 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd74P04441 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd74P04441 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd74P04441 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd74P04441 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd74P04441 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd74P04441 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.55■□□□□ 0.72
Cd74P04441 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd74P04441 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Cd74P04441 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cd74P04441 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd74P04441 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd74P04441 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd74P04441 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.53■□□□□ 0.72
Cd74P04441 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd74P04441 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd74P04441 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.53■□□□□ 0.72
Cd74P04441 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms