Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CcnkO88874 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CcnkO88874 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CcnkO88874 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CcnkO88874 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CcnkO88874 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CcnkO88874 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CcnkO88874 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CcnkO88874 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CcnkO88874 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CcnkO88874 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CcnkO88874 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
CcnkO88874 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CcnkO88874 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.86■□□□□ 0.93
CcnkO88874 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.86■□□□□ 0.93
CcnkO88874 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CcnkO88874 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CcnkO88874 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CcnkO88874 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CcnkO88874 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CcnkO88874 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CcnkO88874 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CcnkO88874 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CcnkO88874 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CcnkO88874 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CcnkO88874 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
CcnkO88874 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CcnkO88874 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CcnkO88874 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CcnkO88874 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.83■□□□□ 0.93
CcnkO88874 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CcnkO88874 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CcnkO88874 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CcnkO88874 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
CcnkO88874 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CcnkO88874 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CcnkO88874 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CcnkO88874 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.81■□□□□ 0.92
CcnkO88874 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.81■□□□□ 0.92
CcnkO88874 Zfp131-205ENSMUST00000223812 663 ntBASIC20.81■□□□□ 0.92
CcnkO88874 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CcnkO88874 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CcnkO88874 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CcnkO88874 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CcnkO88874 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CcnkO88874 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.79■□□□□ 0.92
CcnkO88874 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CcnkO88874 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CcnkO88874 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CcnkO88874 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CcnkO88874 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CcnkO88874 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CcnkO88874 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CcnkO88874 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CcnkO88874 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CcnkO88874 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CcnkO88874 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CcnkO88874 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CcnkO88874 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.74■□□□□ 0.91
CcnkO88874 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CcnkO88874 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.73■□□□□ 0.91
CcnkO88874 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.73■□□□□ 0.91
CcnkO88874 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CcnkO88874 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CcnkO88874 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.73■□□□□ 0.91
CcnkO88874 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CcnkO88874 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CcnkO88874 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CcnkO88874 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CcnkO88874 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CcnkO88874 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CcnkO88874 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CcnkO88874 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CcnkO88874 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CcnkO88874 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CcnkO88874 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CcnkO88874 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CcnkO88874 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CcnkO88874 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.67■□□□□ 0.9
CcnkO88874 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.67■□□□□ 0.9
CcnkO88874 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CcnkO88874 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CcnkO88874 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.66■□□□□ 0.9
CcnkO88874 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CcnkO88874 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CcnkO88874 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CcnkO88874 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CcnkO88874 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CcnkO88874 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CcnkO88874 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CcnkO88874 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CcnkO88874 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CcnkO88874 Gm9397-201ENSMUST00000200125 605 ntBASIC20.64■□□□□ 0.89
CcnkO88874 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CcnkO88874 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CcnkO88874 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CcnkO88874 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CcnkO88874 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CcnkO88874 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
CcnkO88874 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms