Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdha4O88689 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdha4O88689 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.01■■□□□ 1.91
Pcdha4O88689 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.01■■□□□ 1.91
Pcdha4O88689 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha4O88689 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha4O88689 Gm30023-201ENSMUST00000197970 889 ntBASIC26.99■■□□□ 1.91
Pcdha4O88689 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.98■■□□□ 1.91
Pcdha4O88689 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Pcdha4O88689 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdha4O88689 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha4O88689 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Pcdha4O88689 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.95■■□□□ 1.9
Pcdha4O88689 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha4O88689 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.94■■□□□ 1.9
Pcdha4O88689 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdha4O88689 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdha4O88689 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha4O88689 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha4O88689 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha4O88689 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdha4O88689 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Pcdha4O88689 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha4O88689 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha4O88689 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.9■■□□□ 1.9
Pcdha4O88689 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha4O88689 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha4O88689 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha4O88689 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha4O88689 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pcdha4O88689 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha4O88689 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha4O88689 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha4O88689 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdha4O88689 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.87■■□□□ 1.89
Pcdha4O88689 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.86■■□□□ 1.89
Pcdha4O88689 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdha4O88689 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Pcdha4O88689 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdha4O88689 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdha4O88689 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.85■■□□□ 1.89
Pcdha4O88689 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.84■■□□□ 1.89
Pcdha4O88689 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.84■■□□□ 1.89
Pcdha4O88689 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Pcdha4O88689 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdha4O88689 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha4O88689 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha4O88689 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha4O88689 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha4O88689 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha4O88689 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Pcdha4O88689 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.8■■□□□ 1.88
Pcdha4O88689 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdha4O88689 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Pcdha4O88689 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdha4O88689 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.79■■□□□ 1.88
Pcdha4O88689 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
Pcdha4O88689 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha4O88689 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha4O88689 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha4O88689 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha4O88689 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha4O88689 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha4O88689 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha4O88689 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.76■■□□□ 1.87
Pcdha4O88689 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdha4O88689 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.76■■□□□ 1.87
Pcdha4O88689 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha4O88689 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha4O88689 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
Pcdha4O88689 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha4O88689 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdha4O88689 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdha4O88689 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdha4O88689 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdha4O88689 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.72■■□□□ 1.87
Pcdha4O88689 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Pcdha4O88689 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.71■■□□□ 1.87
Pcdha4O88689 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.7■■□□□ 1.87
Pcdha4O88689 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdha4O88689 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha4O88689 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdha4O88689 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha4O88689 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha4O88689 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha4O88689 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha4O88689 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdha4O88689 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdha4O88689 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdha4O88689 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.64■■□□□ 1.86
Pcdha4O88689 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
Pcdha4O88689 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.64■■□□□ 1.86
Pcdha4O88689 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
Pcdha4O88689 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha4O88689 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.62■■□□□ 1.85
Pcdha4O88689 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha4O88689 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.6■■□□□ 1.85
Pcdha4O88689 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha4O88689 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdha4O88689 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms