Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sap30O88574 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sap30O88574 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sap30O88574 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.27■□□□□ 0.52
Sap30O88574 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.27■□□□□ 0.52
Sap30O88574 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sap30O88574 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.26■□□□□ 0.51
Sap30O88574 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Sap30O88574 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sap30O88574 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.25■□□□□ 0.51
Sap30O88574 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sap30O88574 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sap30O88574 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sap30O88574 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sap30O88574 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
Sap30O88574 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.24■□□□□ 0.51
Sap30O88574 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sap30O88574 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Sap30O88574 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sap30O88574 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sap30O88574 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sap30O88574 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.22■□□□□ 0.51
Sap30O88574 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sap30O88574 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sap30O88574 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.22■□□□□ 0.51
Sap30O88574 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sap30O88574 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sap30O88574 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sap30O88574 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sap30O88574 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sap30O88574 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sap30O88574 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sap30O88574 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sap30O88574 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sap30O88574 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sap30O88574 Gm7432-201ENSMUST00000210343 879 ntBASIC18.2■□□□□ 0.5
Sap30O88574 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sap30O88574 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sap30O88574 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sap30O88574 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.18■□□□□ 0.5
Sap30O88574 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sap30O88574 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sap30O88574 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sap30O88574 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sap30O88574 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sap30O88574 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sap30O88574 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sap30O88574 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sap30O88574 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sap30O88574 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.16■□□□□ 0.5
Sap30O88574 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.16■□□□□ 0.5
Sap30O88574 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sap30O88574 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sap30O88574 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sap30O88574 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sap30O88574 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.15■□□□□ 0.5
Sap30O88574 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sap30O88574 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sap30O88574 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sap30O88574 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Sap30O88574 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sap30O88574 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sap30O88574 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.15■□□□□ 0.5
Sap30O88574 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sap30O88574 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sap30O88574 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sap30O88574 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sap30O88574 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sap30O88574 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sap30O88574 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sap30O88574 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sap30O88574 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sap30O88574 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sap30O88574 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.13■□□□□ 0.49
Sap30O88574 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sap30O88574 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sap30O88574 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sap30O88574 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sap30O88574 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sap30O88574 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.12■□□□□ 0.49
Sap30O88574 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sap30O88574 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sap30O88574 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sap30O88574 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.11■□□□□ 0.49
Sap30O88574 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sap30O88574 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.1■□□□□ 0.49
Sap30O88574 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sap30O88574 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.1■□□□□ 0.49
Sap30O88574 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.09■□□□□ 0.49
Sap30O88574 Gm11599-201ENSMUST00000118720 878 ntBASIC18.09■□□□□ 0.49
Sap30O88574 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.09■□□□□ 0.49
Sap30O88574 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Sap30O88574 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sap30O88574 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.08■□□□□ 0.48
Sap30O88574 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sap30O88574 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sap30O88574 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sap30O88574 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sap30O88574 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sap30O88574 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms