Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm6821-201ENSMUST00000107540 542 ntBASIC26.48■■□□□ 1.83
IkbkbO88351 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
IkbkbO88351 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
IkbkbO88351 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.47■■□□□ 1.83
IkbkbO88351 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
IkbkbO88351 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
IkbkbO88351 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
IkbkbO88351 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
IkbkbO88351 Gm8503-201ENSMUST00000118131 455 ntBASIC26.46■■□□□ 1.83
IkbkbO88351 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
IkbkbO88351 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.46■■□□□ 1.83
IkbkbO88351 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
IkbkbO88351 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
IkbkbO88351 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
IkbkbO88351 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.44■■□□□ 1.82
IkbkbO88351 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
IkbkbO88351 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
IkbkbO88351 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.43■■□□□ 1.82
IkbkbO88351 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
IkbkbO88351 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
IkbkbO88351 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.42■■□□□ 1.82
IkbkbO88351 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
IkbkbO88351 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IkbkbO88351 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IkbkbO88351 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.41■■□□□ 1.82
IkbkbO88351 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
IkbkbO88351 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.38■■□□□ 1.81
IkbkbO88351 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
IkbkbO88351 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
IkbkbO88351 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
IkbkbO88351 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
IkbkbO88351 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.36■■□□□ 1.81
IkbkbO88351 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
IkbkbO88351 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IkbkbO88351 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IkbkbO88351 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IkbkbO88351 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IkbkbO88351 Nkain2-201ENSMUST00000092602 558 ntBASIC26.35■■□□□ 1.81
IkbkbO88351 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
IkbkbO88351 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
IkbkbO88351 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IkbkbO88351 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IkbkbO88351 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IkbkbO88351 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
IkbkbO88351 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.32■■□□□ 1.8
IkbkbO88351 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IkbkbO88351 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IkbkbO88351 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
IkbkbO88351 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
IkbkbO88351 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
IkbkbO88351 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
IkbkbO88351 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
IkbkbO88351 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
IkbkbO88351 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
IkbkbO88351 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
IkbkbO88351 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IkbkbO88351 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IkbkbO88351 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IkbkbO88351 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
IkbkbO88351 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
IkbkbO88351 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
IkbkbO88351 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
IkbkbO88351 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
IkbkbO88351 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IkbkbO88351 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IkbkbO88351 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IkbkbO88351 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
IkbkbO88351 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.21■■□□□ 1.79
IkbkbO88351 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IkbkbO88351 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IkbkbO88351 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
IkbkbO88351 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
IkbkbO88351 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.2■■□□□ 1.78
IkbkbO88351 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
IkbkbO88351 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
IkbkbO88351 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.18■■□□□ 1.78
IkbkbO88351 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
IkbkbO88351 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.18■■□□□ 1.78
IkbkbO88351 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
IkbkbO88351 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
IkbkbO88351 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
IkbkbO88351 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
IkbkbO88351 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
IkbkbO88351 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
IkbkbO88351 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
IkbkbO88351 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
IkbkbO88351 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
IkbkbO88351 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.16■■□□□ 1.78
IkbkbO88351 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
IkbkbO88351 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
IkbkbO88351 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
IkbkbO88351 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
IkbkbO88351 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
IkbkbO88351 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.13■■□□□ 1.77
IkbkbO88351 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
IkbkbO88351 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.12■■□□□ 1.77
IkbkbO88351 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
IkbkbO88351 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
IkbkbO88351 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
IkbkbO88351 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms