Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Zfp131-205ENSMUST00000223812 663 ntBASIC21.59■■□□□ 1.05
Alx3O70137 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Alx3O70137 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Alx3O70137 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Alx3O70137 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Alx3O70137 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx3O70137 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Alx3O70137 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.56■■□□□ 1.04
Alx3O70137 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.53■■□□□ 1.04
Alx3O70137 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alx3O70137 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Alx3O70137 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alx3O70137 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx3O70137 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Alx3O70137 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx3O70137 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx3O70137 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.51■■□□□ 1.03
Alx3O70137 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx3O70137 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx3O70137 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx3O70137 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx3O70137 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Alx3O70137 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Alx3O70137 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx3O70137 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Alx3O70137 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx3O70137 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx3O70137 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Alx3O70137 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx3O70137 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx3O70137 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.47■■□□□ 1.03
Alx3O70137 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Alx3O70137 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx3O70137 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.46■■□□□ 1.03
Alx3O70137 Gm24970-201ENSMUST00000175582 82 ntBASIC21.46■■□□□ 1.03
Alx3O70137 Gm9397-201ENSMUST00000200125 605 ntBASIC21.46■■□□□ 1.03
Alx3O70137 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Alx3O70137 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx3O70137 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Alx3O70137 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.45■■□□□ 1.02
Alx3O70137 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.45■■□□□ 1.02
Alx3O70137 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx3O70137 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx3O70137 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx3O70137 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx3O70137 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx3O70137 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.43■■□□□ 1.02
Alx3O70137 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alx3O70137 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx3O70137 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx3O70137 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx3O70137 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx3O70137 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx3O70137 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.41■■□□□ 1.02
Alx3O70137 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Alx3O70137 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.41■■□□□ 1.02
Alx3O70137 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Alx3O70137 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx3O70137 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Alx3O70137 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.4■■□□□ 1.02
Alx3O70137 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Alx3O70137 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.39■■□□□ 1.01
Alx3O70137 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Alx3O70137 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Alx3O70137 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx3O70137 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx3O70137 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx3O70137 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Alx3O70137 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.35■■□□□ 1.01
Alx3O70137 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alx3O70137 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Alx3O70137 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Alx3O70137 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alx3O70137 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Alx3O70137 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Alx3O70137 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alx3O70137 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.33■■□□□ 1.01
Alx3O70137 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Alx3O70137 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alx3O70137 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.33■■□□□ 1.01
Alx3O70137 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Alx3O70137 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.32■■□□□ 1
Alx3O70137 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.32■■□□□ 1
Alx3O70137 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.32■■□□□ 1
Alx3O70137 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Alx3O70137 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Alx3O70137 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Alx3O70137 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alx3O70137 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alx3O70137 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alx3O70137 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alx3O70137 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alx3O70137 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alx3O70137 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Alx3O70137 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.29■■□□□ 1
Alx3O70137 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Alx3O70137 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.29■■□□□ 1
Alx3O70137 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Alx3O70137 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Alx3O70137 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms