Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6dO55057 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pde6dO55057 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pde6dO55057 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pde6dO55057 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pde6dO55057 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pde6dO55057 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pde6dO55057 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pde6dO55057 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pde6dO55057 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pde6dO55057 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pde6dO55057 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pde6dO55057 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pde6dO55057 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.75■□□□□ 0.59
Pde6dO55057 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pde6dO55057 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6dO55057 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6dO55057 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.73■□□□□ 0.59
Pde6dO55057 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6dO55057 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6dO55057 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.72■□□□□ 0.59
Pde6dO55057 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6dO55057 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6dO55057 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6dO55057 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.58
Pde6dO55057 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6dO55057 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6dO55057 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6dO55057 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6dO55057 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6dO55057 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6dO55057 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.69■□□□□ 0.58
Pde6dO55057 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6dO55057 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pde6dO55057 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6dO55057 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6dO55057 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6dO55057 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pde6dO55057 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6dO55057 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pde6dO55057 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6dO55057 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6dO55057 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6dO55057 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6dO55057 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6dO55057 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6dO55057 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6dO55057 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6dO55057 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6dO55057 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6dO55057 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6dO55057 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.62■□□□□ 0.57
Pde6dO55057 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pde6dO55057 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6dO55057 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6dO55057 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.61■□□□□ 0.57
Pde6dO55057 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.61■□□□□ 0.57
Pde6dO55057 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pde6dO55057 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6dO55057 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6dO55057 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6dO55057 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6dO55057 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6dO55057 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6dO55057 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6dO55057 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pde6dO55057 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6dO55057 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6dO55057 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6dO55057 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6dO55057 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Pde6dO55057 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6dO55057 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6dO55057 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6dO55057 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pde6dO55057 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6dO55057 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6dO55057 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.56■□□□□ 0.56
Pde6dO55057 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6dO55057 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6dO55057 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6dO55057 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Pde6dO55057 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pde6dO55057 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pde6dO55057 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6dO55057 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6dO55057 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6dO55057 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6dO55057 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6dO55057 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6dO55057 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6dO55057 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6dO55057 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pde6dO55057 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms