Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.65■■□□□ 1.7
Kcnu1O54982 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Kcnu1O54982 Gm45855-201ENSMUST00000212546 880 ntBASIC25.64■■□□□ 1.7
Kcnu1O54982 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Kcnu1O54982 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
Kcnu1O54982 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.63■■□□□ 1.69
Kcnu1O54982 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Kcnu1O54982 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
Kcnu1O54982 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Kcnu1O54982 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Kcnu1O54982 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Kcnu1O54982 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Kcnu1O54982 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Kcnu1O54982 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
Kcnu1O54982 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Kcnu1O54982 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.61■■□□□ 1.69
Kcnu1O54982 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Kcnu1O54982 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Kcnu1O54982 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Kcnu1O54982 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Kcnu1O54982 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Kcnu1O54982 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Kcnu1O54982 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Kcnu1O54982 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Kcnu1O54982 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Kcnu1O54982 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.56■■□□□ 1.68
Kcnu1O54982 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Kcnu1O54982 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kcnu1O54982 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
Kcnu1O54982 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Kcnu1O54982 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Kcnu1O54982 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
Kcnu1O54982 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Kcnu1O54982 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Kcnu1O54982 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Kcnu1O54982 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Kcnu1O54982 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.5■■□□□ 1.67
Kcnu1O54982 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Kcnu1O54982 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Kcnu1O54982 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
Kcnu1O54982 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Kcnu1O54982 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Kcnu1O54982 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Kcnu1O54982 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Kcnu1O54982 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Kcnu1O54982 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Kcnu1O54982 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Kcnu1O54982 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Kcnu1O54982 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Kcnu1O54982 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Kcnu1O54982 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Kcnu1O54982 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Kcnu1O54982 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Kcnu1O54982 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
Kcnu1O54982 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Kcnu1O54982 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.44■■□□□ 1.66
Kcnu1O54982 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Kcnu1O54982 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Kcnu1O54982 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Kcnu1O54982 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.42■■□□□ 1.66
Kcnu1O54982 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Kcnu1O54982 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Kcnu1O54982 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kcnu1O54982 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kcnu1O54982 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kcnu1O54982 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Kcnu1O54982 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kcnu1O54982 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kcnu1O54982 Gm30023-201ENSMUST00000197970 889 ntBASIC25.37■■□□□ 1.65
Kcnu1O54982 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kcnu1O54982 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kcnu1O54982 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kcnu1O54982 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kcnu1O54982 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.36■■□□□ 1.65
Kcnu1O54982 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Kcnu1O54982 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kcnu1O54982 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kcnu1O54982 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Kcnu1O54982 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kcnu1O54982 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
Kcnu1O54982 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kcnu1O54982 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Kcnu1O54982 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Kcnu1O54982 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.32■■□□□ 1.64
Kcnu1O54982 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Kcnu1O54982 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Kcnu1O54982 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Kcnu1O54982 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kcnu1O54982 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.3■■□□□ 1.64
Kcnu1O54982 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.29■■□□□ 1.64
Kcnu1O54982 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Kcnu1O54982 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.29■■□□□ 1.64
Kcnu1O54982 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Kcnu1O54982 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.29■■□□□ 1.64
Kcnu1O54982 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Kcnu1O54982 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Kcnu1O54982 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Kcnu1O54982 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kcnu1O54982 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kcnu1O54982 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms