Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dkk1O54908 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dkk1O54908 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dkk1O54908 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dkk1O54908 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dkk1O54908 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dkk1O54908 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dkk1O54908 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dkk1O54908 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.66■□□□□ 0.9
Dkk1O54908 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dkk1O54908 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dkk1O54908 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.65■□□□□ 0.9
Dkk1O54908 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dkk1O54908 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Dkk1O54908 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.64■□□□□ 0.89
Dkk1O54908 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dkk1O54908 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Dkk1O54908 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dkk1O54908 Nkain2-201ENSMUST00000092602 558 ntBASIC20.63■□□□□ 0.89
Dkk1O54908 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dkk1O54908 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.63■□□□□ 0.89
Dkk1O54908 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dkk1O54908 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Dkk1O54908 Gm30023-201ENSMUST00000197970 889 ntBASIC20.62■□□□□ 0.89
Dkk1O54908 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Dkk1O54908 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dkk1O54908 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dkk1O54908 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dkk1O54908 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dkk1O54908 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.6■□□□□ 0.89
Dkk1O54908 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.59■□□□□ 0.89
Dkk1O54908 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dkk1O54908 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dkk1O54908 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Dkk1O54908 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.57■□□□□ 0.88
Dkk1O54908 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dkk1O54908 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dkk1O54908 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dkk1O54908 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dkk1O54908 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dkk1O54908 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dkk1O54908 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dkk1O54908 Gm8503-201ENSMUST00000118131 455 ntBASIC20.54■□□□□ 0.88
Dkk1O54908 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dkk1O54908 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dkk1O54908 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.53■□□□□ 0.88
Dkk1O54908 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Dkk1O54908 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dkk1O54908 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dkk1O54908 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Dkk1O54908 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Dkk1O54908 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dkk1O54908 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Dkk1O54908 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dkk1O54908 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Dkk1O54908 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Dkk1O54908 Gm6821-201ENSMUST00000107540 542 ntBASIC20.51■□□□□ 0.87
Dkk1O54908 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Dkk1O54908 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dkk1O54908 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dkk1O54908 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dkk1O54908 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.5■□□□□ 0.87
Dkk1O54908 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dkk1O54908 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dkk1O54908 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dkk1O54908 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.48■□□□□ 0.87
Dkk1O54908 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dkk1O54908 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.48■□□□□ 0.87
Dkk1O54908 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.47■□□□□ 0.87
Dkk1O54908 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Dkk1O54908 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dkk1O54908 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dkk1O54908 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dkk1O54908 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Dkk1O54908 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Dkk1O54908 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.44■□□□□ 0.86
Dkk1O54908 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Dkk1O54908 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Dkk1O54908 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Dkk1O54908 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.42■□□□□ 0.86
Dkk1O54908 Gm15823-201ENSMUST00000064305 670 ntBASIC20.42■□□□□ 0.86
Dkk1O54908 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.42■□□□□ 0.86
Dkk1O54908 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.41■□□□□ 0.86
Dkk1O54908 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.41■□□□□ 0.86
Dkk1O54908 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dkk1O54908 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.41■□□□□ 0.86
Dkk1O54908 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dkk1O54908 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Dkk1O54908 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.4■□□□□ 0.86
Dkk1O54908 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dkk1O54908 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dkk1O54908 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dkk1O54908 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Dkk1O54908 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dkk1O54908 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.38■□□□□ 0.85
Dkk1O54908 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Dkk1O54908 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.38■□□□□ 0.85
Dkk1O54908 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Dkk1O54908 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.37■□□□□ 0.85
Dkk1O54908 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms