Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.97■□□□□ 0.31
Ndufa1O35683 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndufa1O35683 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndufa1O35683 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Ndufa1O35683 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.97■□□□□ 0.31
Ndufa1O35683 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndufa1O35683 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndufa1O35683 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ndufa1O35683 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndufa1O35683 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.96■□□□□ 0.3
Ndufa1O35683 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndufa1O35683 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndufa1O35683 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndufa1O35683 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.95■□□□□ 0.3
Ndufa1O35683 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ndufa1O35683 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ndufa1O35683 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndufa1O35683 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndufa1O35683 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa1O35683 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa1O35683 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa1O35683 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.93■□□□□ 0.3
Ndufa1O35683 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndufa1O35683 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ndufa1O35683 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa1O35683 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ndufa1O35683 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa1O35683 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa1O35683 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndufa1O35683 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa1O35683 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa1O35683 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa1O35683 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ndufa1O35683 Peli2-204ENSMUST00000226513 1320 ntBASIC16.91■□□□□ 0.3
Ndufa1O35683 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.9■□□□□ 0.3
Ndufa1O35683 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.9■□□□□ 0.3
Ndufa1O35683 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ndufa1O35683 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.89■□□□□ 0.3
Ndufa1O35683 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ndufa1O35683 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ndufa1O35683 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
Ndufa1O35683 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ndufa1O35683 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa1O35683 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa1O35683 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ndufa1O35683 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ndufa1O35683 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa1O35683 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ndufa1O35683 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa1O35683 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa1O35683 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa1O35683 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa1O35683 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ndufa1O35683 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa1O35683 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ndufa1O35683 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndufa1O35683 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.86■□□□□ 0.29
Ndufa1O35683 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.86■□□□□ 0.29
Ndufa1O35683 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndufa1O35683 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ndufa1O35683 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndufa1O35683 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndufa1O35683 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.85■□□□□ 0.29
Ndufa1O35683 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ndufa1O35683 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ndufa1O35683 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndufa1O35683 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ndufa1O35683 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ndufa1O35683 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ndufa1O35683 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ndufa1O35683 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ndufa1O35683 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa1O35683 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa1O35683 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa1O35683 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa1O35683 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa1O35683 Gm24804-201ENSMUST00000174982 85 ntBASIC16.82■□□□□ 0.28
Ndufa1O35683 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ndufa1O35683 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.81■□□□□ 0.28
Ndufa1O35683 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ndufa1O35683 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa1O35683 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa1O35683 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa1O35683 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.8■□□□□ 0.28
Ndufa1O35683 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa1O35683 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ndufa1O35683 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa1O35683 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa1O35683 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa1O35683 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa1O35683 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.79■□□□□ 0.28
Ndufa1O35683 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa1O35683 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa1O35683 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms