Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ercc2O08811 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ercc2O08811 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ercc2O08811 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Ercc2O08811 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ercc2O08811 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ercc2O08811 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ercc2O08811 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ercc2O08811 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ercc2O08811 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ercc2O08811 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.55■■□□□ 1.52
Ercc2O08811 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.55■■□□□ 1.52
Ercc2O08811 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ercc2O08811 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ercc2O08811 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.54■■□□□ 1.52
Ercc2O08811 Gm30023-201ENSMUST00000197970 889 ntBASIC24.54■■□□□ 1.52
Ercc2O08811 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ercc2O08811 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.53■■□□□ 1.52
Ercc2O08811 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ercc2O08811 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.53■■□□□ 1.52
Ercc2O08811 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ercc2O08811 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ercc2O08811 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ercc2O08811 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ercc2O08811 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ercc2O08811 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Ercc2O08811 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Ercc2O08811 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.49■■□□□ 1.51
Ercc2O08811 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ercc2O08811 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Ercc2O08811 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ercc2O08811 Nkain2-201ENSMUST00000092602 558 ntBASIC24.48■■□□□ 1.51
Ercc2O08811 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ercc2O08811 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
Ercc2O08811 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.47■■□□□ 1.51
Ercc2O08811 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ercc2O08811 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ercc2O08811 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Ercc2O08811 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.45■■□□□ 1.5
Ercc2O08811 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
Ercc2O08811 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ercc2O08811 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ercc2O08811 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ercc2O08811 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ercc2O08811 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ercc2O08811 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ercc2O08811 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ercc2O08811 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ercc2O08811 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.42■■□□□ 1.5
Ercc2O08811 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ercc2O08811 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ercc2O08811 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ercc2O08811 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Ercc2O08811 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ercc2O08811 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ercc2O08811 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ercc2O08811 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.4■■□□□ 1.5
Ercc2O08811 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ercc2O08811 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ercc2O08811 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Ercc2O08811 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ercc2O08811 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ercc2O08811 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Ercc2O08811 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ercc2O08811 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ercc2O08811 Gm6821-201ENSMUST00000107540 542 ntBASIC24.35■■□□□ 1.49
Ercc2O08811 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ercc2O08811 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ercc2O08811 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.33■■□□□ 1.49
Ercc2O08811 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.33■■□□□ 1.49
Ercc2O08811 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.33■■□□□ 1.49
Ercc2O08811 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Ercc2O08811 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.3■■□□□ 1.48
Ercc2O08811 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ercc2O08811 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ercc2O08811 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ercc2O08811 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ercc2O08811 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ercc2O08811 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.28■■□□□ 1.48
Ercc2O08811 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Ercc2O08811 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ercc2O08811 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ercc2O08811 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.26■■□□□ 1.47
Ercc2O08811 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.26■■□□□ 1.47
Ercc2O08811 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ercc2O08811 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ercc2O08811 Gm8503-201ENSMUST00000118131 455 ntBASIC24.25■■□□□ 1.47
Ercc2O08811 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.25■■□□□ 1.47
Ercc2O08811 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.25■■□□□ 1.47
Ercc2O08811 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ercc2O08811 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms