Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.84■■□□□ 1.41
Sgo2bJ3QMK1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Sgo2bJ3QMK1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sgo2bJ3QMK1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sgo2bJ3QMK1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sgo2bJ3QMK1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sgo2bJ3QMK1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sgo2bJ3QMK1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sgo2bJ3QMK1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sgo2bJ3QMK1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sgo2bJ3QMK1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sgo2bJ3QMK1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Sgo2bJ3QMK1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sgo2bJ3QMK1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sgo2bJ3QMK1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sgo2bJ3QMK1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Sgo2bJ3QMK1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sgo2bJ3QMK1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sgo2bJ3QMK1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sgo2bJ3QMK1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sgo2bJ3QMK1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Sgo2bJ3QMK1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Sgo2bJ3QMK1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sgo2bJ3QMK1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Sgo2bJ3QMK1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sgo2bJ3QMK1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.74■■□□□ 1.39
Sgo2bJ3QMK1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
Sgo2bJ3QMK1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sgo2bJ3QMK1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Sgo2bJ3QMK1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Sgo2bJ3QMK1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sgo2bJ3QMK1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sgo2bJ3QMK1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sgo2bJ3QMK1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sgo2bJ3QMK1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Sgo2bJ3QMK1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sgo2bJ3QMK1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sgo2bJ3QMK1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.71■■□□□ 1.39
Sgo2bJ3QMK1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.7■■□□□ 1.38
Sgo2bJ3QMK1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sgo2bJ3QMK1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.69■■□□□ 1.38
Sgo2bJ3QMK1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Sgo2bJ3QMK1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sgo2bJ3QMK1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Sgo2bJ3QMK1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sgo2bJ3QMK1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sgo2bJ3QMK1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sgo2bJ3QMK1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sgo2bJ3QMK1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Sgo2bJ3QMK1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sgo2bJ3QMK1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sgo2bJ3QMK1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sgo2bJ3QMK1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Sgo2bJ3QMK1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sgo2bJ3QMK1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sgo2bJ3QMK1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Sgo2bJ3QMK1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sgo2bJ3QMK1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sgo2bJ3QMK1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.64■■□□□ 1.38
Sgo2bJ3QMK1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sgo2bJ3QMK1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.64■■□□□ 1.37
Sgo2bJ3QMK1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sgo2bJ3QMK1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sgo2bJ3QMK1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sgo2bJ3QMK1 Gm30023-201ENSMUST00000197970 889 ntBASIC23.62■■□□□ 1.37
Sgo2bJ3QMK1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sgo2bJ3QMK1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sgo2bJ3QMK1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Sgo2bJ3QMK1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sgo2bJ3QMK1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sgo2bJ3QMK1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.61■■□□□ 1.37
Sgo2bJ3QMK1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Sgo2bJ3QMK1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Sgo2bJ3QMK1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.6■■□□□ 1.37
Sgo2bJ3QMK1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.6■■□□□ 1.37
Sgo2bJ3QMK1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sgo2bJ3QMK1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sgo2bJ3QMK1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sgo2bJ3QMK1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.58■■□□□ 1.37
Sgo2bJ3QMK1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Sgo2bJ3QMK1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Sgo2bJ3QMK1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sgo2bJ3QMK1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
Sgo2bJ3QMK1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sgo2bJ3QMK1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Sgo2bJ3QMK1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.56■■□□□ 1.36
Sgo2bJ3QMK1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sgo2bJ3QMK1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sgo2bJ3QMK1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sgo2bJ3QMK1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sgo2bJ3QMK1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sgo2bJ3QMK1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.54■■□□□ 1.36
Sgo2bJ3QMK1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Sgo2bJ3QMK1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms