Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
R3hdm1E9Q9Q2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
R3hdm1E9Q9Q2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
R3hdm1E9Q9Q2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
R3hdm1E9Q9Q2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
R3hdm1E9Q9Q2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.49■■□□□ 1.83
R3hdm1E9Q9Q2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.49■■□□□ 1.83
R3hdm1E9Q9Q2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
R3hdm1E9Q9Q2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.48■■□□□ 1.83
R3hdm1E9Q9Q2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.48■■□□□ 1.83
R3hdm1E9Q9Q2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
R3hdm1E9Q9Q2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.47■■□□□ 1.83
R3hdm1E9Q9Q2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
R3hdm1E9Q9Q2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
R3hdm1E9Q9Q2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
R3hdm1E9Q9Q2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
R3hdm1E9Q9Q2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
R3hdm1E9Q9Q2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
R3hdm1E9Q9Q2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
R3hdm1E9Q9Q2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
R3hdm1E9Q9Q2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.43■■□□□ 1.82
R3hdm1E9Q9Q2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
R3hdm1E9Q9Q2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
R3hdm1E9Q9Q2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.42■■□□□ 1.82
R3hdm1E9Q9Q2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.42■■□□□ 1.82
R3hdm1E9Q9Q2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
R3hdm1E9Q9Q2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
R3hdm1E9Q9Q2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
R3hdm1E9Q9Q2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
R3hdm1E9Q9Q2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
R3hdm1E9Q9Q2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
R3hdm1E9Q9Q2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.4■■□□□ 1.82
R3hdm1E9Q9Q2 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.38■■□□□ 1.81
R3hdm1E9Q9Q2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
R3hdm1E9Q9Q2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.37■■□□□ 1.81
R3hdm1E9Q9Q2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.37■■□□□ 1.81
R3hdm1E9Q9Q2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
R3hdm1E9Q9Q2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
R3hdm1E9Q9Q2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.37■■□□□ 1.81
R3hdm1E9Q9Q2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
R3hdm1E9Q9Q2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
R3hdm1E9Q9Q2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
R3hdm1E9Q9Q2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
R3hdm1E9Q9Q2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
R3hdm1E9Q9Q2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
R3hdm1E9Q9Q2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
R3hdm1E9Q9Q2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
R3hdm1E9Q9Q2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
R3hdm1E9Q9Q2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
R3hdm1E9Q9Q2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.32■■□□□ 1.8
R3hdm1E9Q9Q2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
R3hdm1E9Q9Q2 Amer2-203ENSMUST00000225247 2662 ntBASIC26.32■■□□□ 1.8
R3hdm1E9Q9Q2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
R3hdm1E9Q9Q2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3hdm1E9Q9Q2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3hdm1E9Q9Q2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
R3hdm1E9Q9Q2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
R3hdm1E9Q9Q2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
R3hdm1E9Q9Q2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
R3hdm1E9Q9Q2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
R3hdm1E9Q9Q2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
R3hdm1E9Q9Q2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
R3hdm1E9Q9Q2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3hdm1E9Q9Q2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3hdm1E9Q9Q2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
R3hdm1E9Q9Q2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
R3hdm1E9Q9Q2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
R3hdm1E9Q9Q2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
R3hdm1E9Q9Q2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
R3hdm1E9Q9Q2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
R3hdm1E9Q9Q2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
R3hdm1E9Q9Q2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
R3hdm1E9Q9Q2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
R3hdm1E9Q9Q2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
R3hdm1E9Q9Q2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
R3hdm1E9Q9Q2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
R3hdm1E9Q9Q2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
R3hdm1E9Q9Q2 Scarna2-201ENSMUST00000157560 414 ntBASIC26.19■■□□□ 1.78
R3hdm1E9Q9Q2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
R3hdm1E9Q9Q2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
R3hdm1E9Q9Q2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
R3hdm1E9Q9Q2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.18■■□□□ 1.78
R3hdm1E9Q9Q2 Gm12366-201ENSMUST00000121722 873 ntBASIC26.18■■□□□ 1.78
R3hdm1E9Q9Q2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.18■■□□□ 1.78
R3hdm1E9Q9Q2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.18■■□□□ 1.78
R3hdm1E9Q9Q2 Gm5786-201ENSMUST00000085368 882 ntBASIC26.18■■□□□ 1.78
R3hdm1E9Q9Q2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.17■■□□□ 1.78
R3hdm1E9Q9Q2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
R3hdm1E9Q9Q2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
R3hdm1E9Q9Q2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
R3hdm1E9Q9Q2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.15■■□□□ 1.78
R3hdm1E9Q9Q2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
R3hdm1E9Q9Q2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
R3hdm1E9Q9Q2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms