Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Ccdc141E9Q8Q6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC37.62■■■■□ 3.61
Ccdc141E9Q8Q6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC37.62■■■■□ 3.61
Ccdc141E9Q8Q6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC37.62■■■■□ 3.61
Ccdc141E9Q8Q6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
Ccdc141E9Q8Q6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Ccdc141E9Q8Q6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC37.59■■■■□ 3.61
Ccdc141E9Q8Q6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Ccdc141E9Q8Q6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
Ccdc141E9Q8Q6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
Ccdc141E9Q8Q6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC37.56■■■■□ 3.6
Ccdc141E9Q8Q6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Ccdc141E9Q8Q6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Ccdc141E9Q8Q6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Ccdc141E9Q8Q6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC37.53■■■■□ 3.6
Ccdc141E9Q8Q6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Ccdc141E9Q8Q6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Ccdc141E9Q8Q6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC37.49■■■■□ 3.59
Ccdc141E9Q8Q6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC37.47■■■■□ 3.59
Ccdc141E9Q8Q6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Ccdc141E9Q8Q6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC37.46■■■■□ 3.59
Ccdc141E9Q8Q6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.59
Ccdc141E9Q8Q6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Ccdc141E9Q8Q6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC37.44■■■■□ 3.58
Ccdc141E9Q8Q6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Ccdc141E9Q8Q6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Ccdc141E9Q8Q6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Ccdc141E9Q8Q6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Ccdc141E9Q8Q6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Ccdc141E9Q8Q6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Ccdc141E9Q8Q6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC37.41■■■■□ 3.58
Ccdc141E9Q8Q6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC37.41■■■■□ 3.58
Ccdc141E9Q8Q6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
Ccdc141E9Q8Q6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Ccdc141E9Q8Q6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC37.4■■■■□ 3.58
Ccdc141E9Q8Q6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
Ccdc141E9Q8Q6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC37.39■■■■□ 3.58
Ccdc141E9Q8Q6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Ccdc141E9Q8Q6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
Ccdc141E9Q8Q6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Ccdc141E9Q8Q6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
Ccdc141E9Q8Q6 Scarna2-201ENSMUST00000157560 414 ntBASIC37.35■■■■□ 3.57
Ccdc141E9Q8Q6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
Ccdc141E9Q8Q6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
Ccdc141E9Q8Q6 Pcf11-205ENSMUST00000208255 1720 ntBASIC37.32■■■■□ 3.57
Ccdc141E9Q8Q6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC37.32■■■■□ 3.57
Ccdc141E9Q8Q6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC37.32■■■■□ 3.57
Ccdc141E9Q8Q6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC37.31■■■■□ 3.56
Ccdc141E9Q8Q6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC37.31■■■■□ 3.56
Ccdc141E9Q8Q6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Ccdc141E9Q8Q6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Ccdc141E9Q8Q6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
Ccdc141E9Q8Q6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Ccdc141E9Q8Q6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC37.3■■■■□ 3.56
Ccdc141E9Q8Q6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC37.29■■■■□ 3.56
Ccdc141E9Q8Q6 Gm12366-201ENSMUST00000121722 873 ntBASIC37.29■■■■□ 3.56
Ccdc141E9Q8Q6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC37.29■■■■□ 3.56
Ccdc141E9Q8Q6 Gm9806-201ENSMUST00000051080 552 ntBASIC37.29■■■■□ 3.56
Ccdc141E9Q8Q6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC37.29■■■■□ 3.56
Ccdc141E9Q8Q6 Gm5786-201ENSMUST00000085368 882 ntBASIC37.29■■■■□ 3.56
Ccdc141E9Q8Q6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
Ccdc141E9Q8Q6 Gm11687-201ENSMUST00000118911 886 ntBASIC37.28■■■■□ 3.56
Ccdc141E9Q8Q6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Ccdc141E9Q8Q6 Gm4799-201ENSMUST00000095396 657 ntBASIC37.27■■■■□ 3.56
Ccdc141E9Q8Q6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
Ccdc141E9Q8Q6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Ccdc141E9Q8Q6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
Ccdc141E9Q8Q6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
Ccdc141E9Q8Q6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC37.26■■■■□ 3.56
Ccdc141E9Q8Q6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC37.26■■■■□ 3.56
Ccdc141E9Q8Q6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Ccdc141E9Q8Q6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC37.24■■■■□ 3.55
Ccdc141E9Q8Q6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
Ccdc141E9Q8Q6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Ccdc141E9Q8Q6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
Ccdc141E9Q8Q6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Ccdc141E9Q8Q6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC37.2■■■■□ 3.55
Ccdc141E9Q8Q6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
Ccdc141E9Q8Q6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC37.2■■■■□ 3.55
Ccdc141E9Q8Q6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC37.2■■■■□ 3.55
Ccdc141E9Q8Q6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
Ccdc141E9Q8Q6 Pkd1-207ENSMUST00000228550 1050 ntBASIC37.19■■■■□ 3.54
Ccdc141E9Q8Q6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC37.19■■■■□ 3.54
Ccdc141E9Q8Q6 AC154454.1-201ENSMUST00000225253 216 ntBASIC37.18■■■■□ 3.54
Ccdc141E9Q8Q6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Ccdc141E9Q8Q6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Ccdc141E9Q8Q6 Gm45364-201ENSMUST00000210883 159 ntBASIC37.15■■■■□ 3.54
Ccdc141E9Q8Q6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC37.14■■■■□ 3.54
Ccdc141E9Q8Q6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Ccdc141E9Q8Q6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Ccdc141E9Q8Q6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Ccdc141E9Q8Q6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC37.11■■■■□ 3.53
Ccdc141E9Q8Q6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC37.11■■■■□ 3.53
Ccdc141E9Q8Q6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Ccdc141E9Q8Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Ccdc141E9Q8Q6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Ccdc141E9Q8Q6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC37.07■■■■□ 3.53
Ccdc141E9Q8Q6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC37.06■■■■□ 3.52
Ccdc141E9Q8Q6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC37.06■■■■□ 3.52
Ccdc141E9Q8Q6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC37.05■■■■□ 3.52
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms