Protein–RNA interactions for Protein: E0CZH3

Foxi3, Forkhead box I3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxi3E0CZH3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Foxi3E0CZH3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Foxi3E0CZH3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxi3E0CZH3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxi3E0CZH3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxi3E0CZH3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxi3E0CZH3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Foxi3E0CZH3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Foxi3E0CZH3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxi3E0CZH3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxi3E0CZH3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Foxi3E0CZH3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxi3E0CZH3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Foxi3E0CZH3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxi3E0CZH3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxi3E0CZH3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxi3E0CZH3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxi3E0CZH3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Foxi3E0CZH3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Foxi3E0CZH3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.14■□□□□ 0.5
Foxi3E0CZH3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Foxi3E0CZH3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxi3E0CZH3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxi3E0CZH3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxi3E0CZH3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxi3E0CZH3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxi3E0CZH3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxi3E0CZH3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Foxi3E0CZH3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxi3E0CZH3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxi3E0CZH3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Foxi3E0CZH3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxi3E0CZH3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxi3E0CZH3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxi3E0CZH3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.1■□□□□ 0.49
Foxi3E0CZH3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxi3E0CZH3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxi3E0CZH3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxi3E0CZH3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxi3E0CZH3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxi3E0CZH3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Foxi3E0CZH3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxi3E0CZH3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxi3E0CZH3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxi3E0CZH3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxi3E0CZH3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxi3E0CZH3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Foxi3E0CZH3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxi3E0CZH3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Foxi3E0CZH3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.05■□□□□ 0.48
Foxi3E0CZH3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxi3E0CZH3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxi3E0CZH3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Foxi3E0CZH3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.03■□□□□ 0.48
Foxi3E0CZH3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxi3E0CZH3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Foxi3E0CZH3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxi3E0CZH3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxi3E0CZH3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Foxi3E0CZH3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxi3E0CZH3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Foxi3E0CZH3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxi3E0CZH3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Foxi3E0CZH3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Foxi3E0CZH3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxi3E0CZH3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.01■□□□□ 0.47
Foxi3E0CZH3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxi3E0CZH3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxi3E0CZH3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Foxi3E0CZH3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18■□□□□ 0.47
Foxi3E0CZH3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Foxi3E0CZH3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Foxi3E0CZH3 Gm6277-202ENSMUST00000224036 2779 ntBASIC18■□□□□ 0.47
Foxi3E0CZH3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Foxi3E0CZH3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms