Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-2D3Z4R4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nkx6-2D3Z4R4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nkx6-2D3Z4R4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-2D3Z4R4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-2D3Z4R4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.36■□□□□ 0.69
Nkx6-2D3Z4R4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkx6-2D3Z4R4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkx6-2D3Z4R4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-2D3Z4R4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-2D3Z4R4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-2D3Z4R4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx6-2D3Z4R4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.33■□□□□ 0.68
Nkx6-2D3Z4R4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-2D3Z4R4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.28■□□□□ 0.68
Nkx6-2D3Z4R4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-2D3Z4R4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Nkx6-2D3Z4R4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Gm25238-201ENSMUST00000174914 89 ntBASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-2D3Z4R4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.21■□□□□ 0.67
Nkx6-2D3Z4R4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-2D3Z4R4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-2D3Z4R4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-2D3Z4R4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-2D3Z4R4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-2D3Z4R4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-2D3Z4R4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms