Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usf3B2RUQ2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usf3B2RUQ2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usf3B2RUQ2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usf3B2RUQ2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usf3B2RUQ2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usf3B2RUQ2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Usf3B2RUQ2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usf3B2RUQ2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usf3B2RUQ2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.88■□□□□ 0.77
Usf3B2RUQ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Usf3B2RUQ2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usf3B2RUQ2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.87■□□□□ 0.77
Usf3B2RUQ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usf3B2RUQ2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usf3B2RUQ2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usf3B2RUQ2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usf3B2RUQ2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usf3B2RUQ2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usf3B2RUQ2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usf3B2RUQ2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.84■□□□□ 0.77
Usf3B2RUQ2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usf3B2RUQ2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usf3B2RUQ2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Usf3B2RUQ2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usf3B2RUQ2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Usf3B2RUQ2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usf3B2RUQ2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usf3B2RUQ2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usf3B2RUQ2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usf3B2RUQ2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
Usf3B2RUQ2 Nkain2-201ENSMUST00000092602 558 ntBASIC19.8■□□□□ 0.76
Usf3B2RUQ2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usf3B2RUQ2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usf3B2RUQ2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usf3B2RUQ2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usf3B2RUQ2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usf3B2RUQ2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usf3B2RUQ2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usf3B2RUQ2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.78■□□□□ 0.76
Usf3B2RUQ2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usf3B2RUQ2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usf3B2RUQ2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Usf3B2RUQ2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.77■□□□□ 0.76
Usf3B2RUQ2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usf3B2RUQ2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Usf3B2RUQ2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usf3B2RUQ2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usf3B2RUQ2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.76■□□□□ 0.75
Usf3B2RUQ2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.75■□□□□ 0.75
Usf3B2RUQ2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Usf3B2RUQ2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Usf3B2RUQ2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usf3B2RUQ2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Usf3B2RUQ2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.73■□□□□ 0.75
Usf3B2RUQ2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.73■□□□□ 0.75
Usf3B2RUQ2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.72■□□□□ 0.75
Usf3B2RUQ2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usf3B2RUQ2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usf3B2RUQ2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usf3B2RUQ2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usf3B2RUQ2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usf3B2RUQ2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usf3B2RUQ2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.71■□□□□ 0.75
Usf3B2RUQ2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usf3B2RUQ2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.71■□□□□ 0.75
Usf3B2RUQ2 Gm11599-201ENSMUST00000118720 878 ntBASIC19.71■□□□□ 0.75
Usf3B2RUQ2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usf3B2RUQ2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usf3B2RUQ2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usf3B2RUQ2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usf3B2RUQ2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usf3B2RUQ2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usf3B2RUQ2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usf3B2RUQ2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.66■□□□□ 0.74
Usf3B2RUQ2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usf3B2RUQ2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usf3B2RUQ2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usf3B2RUQ2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.65■□□□□ 0.74
Usf3B2RUQ2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usf3B2RUQ2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usf3B2RUQ2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Usf3B2RUQ2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Usf3B2RUQ2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usf3B2RUQ2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usf3B2RUQ2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.63■□□□□ 0.73
Usf3B2RUQ2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usf3B2RUQ2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usf3B2RUQ2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usf3B2RUQ2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usf3B2RUQ2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms