Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smim17A0A504 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smim17A0A504 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Smim17A0A504 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smim17A0A504 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smim17A0A504 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smim17A0A504 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smim17A0A504 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smim17A0A504 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.61■■□□□ 1.05
Smim17A0A504 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smim17A0A504 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Smim17A0A504 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.6■■□□□ 1.05
Smim17A0A504 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Smim17A0A504 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Smim17A0A504 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smim17A0A504 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smim17A0A504 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smim17A0A504 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smim17A0A504 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smim17A0A504 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Smim17A0A504 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smim17A0A504 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smim17A0A504 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.56■■□□□ 1.04
Smim17A0A504 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smim17A0A504 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.56■■□□□ 1.04
Smim17A0A504 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smim17A0A504 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smim17A0A504 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smim17A0A504 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.55■■□□□ 1.04
Smim17A0A504 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smim17A0A504 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smim17A0A504 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smim17A0A504 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smim17A0A504 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smim17A0A504 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Smim17A0A504 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smim17A0A504 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Smim17A0A504 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smim17A0A504 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smim17A0A504 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Smim17A0A504 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Smim17A0A504 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smim17A0A504 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.5■■□□□ 1.03
Smim17A0A504 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smim17A0A504 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smim17A0A504 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Smim17A0A504 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Smim17A0A504 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smim17A0A504 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smim17A0A504 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smim17A0A504 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smim17A0A504 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.48■■□□□ 1.03
Smim17A0A504 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smim17A0A504 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smim17A0A504 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smim17A0A504 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smim17A0A504 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.46■■□□□ 1.03
Smim17A0A504 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smim17A0A504 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Smim17A0A504 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smim17A0A504 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smim17A0A504 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Smim17A0A504 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smim17A0A504 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smim17A0A504 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smim17A0A504 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smim17A0A504 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smim17A0A504 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Smim17A0A504 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smim17A0A504 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smim17A0A504 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Smim17A0A504 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Smim17A0A504 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smim17A0A504 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.42■■□□□ 1.02
Smim17A0A504 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smim17A0A504 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Smim17A0A504 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Smim17A0A504 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smim17A0A504 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smim17A0A504 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smim17A0A504 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Smim17A0A504 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smim17A0A504 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smim17A0A504 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smim17A0A504 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smim17A0A504 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smim17A0A504 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smim17A0A504 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim17A0A504 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim17A0A504 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smim17A0A504 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim17A0A504 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smim17A0A504 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.35■■□□□ 1.01
Smim17A0A504 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smim17A0A504 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smim17A0A504 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smim17A0A504 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smim17A0A504 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smim17A0A504 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smim17A0A504 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms