Protein–RNA interactions for Protein: A0A140LI04

Gm5890, Predicted gene 5890, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5890A0A140LI04 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm5890A0A140LI04 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm5890A0A140LI04 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5890A0A140LI04 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5890A0A140LI04 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5890A0A140LI04 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5890A0A140LI04 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.33■□□□□ 0.69
Gm5890A0A140LI04 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5890A0A140LI04 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5890A0A140LI04 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5890A0A140LI04 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm5890A0A140LI04 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5890A0A140LI04 Peli2-204ENSMUST00000226513 1320 ntBASIC19.31■□□□□ 0.68
Gm5890A0A140LI04 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.31■□□□□ 0.68
Gm5890A0A140LI04 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5890A0A140LI04 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5890A0A140LI04 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5890A0A140LI04 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5890A0A140LI04 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5890A0A140LI04 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5890A0A140LI04 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5890A0A140LI04 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5890A0A140LI04 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5890A0A140LI04 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm5890A0A140LI04 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Gm5890A0A140LI04 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5890A0A140LI04 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5890A0A140LI04 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5890A0A140LI04 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gm5890A0A140LI04 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5890A0A140LI04 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.24■□□□□ 0.67
Gm5890A0A140LI04 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5890A0A140LI04 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5890A0A140LI04 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gm5890A0A140LI04 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5890A0A140LI04 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5890A0A140LI04 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm5890A0A140LI04 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5890A0A140LI04 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Gm5890A0A140LI04 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5890A0A140LI04 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5890A0A140LI04 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5890A0A140LI04 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm5890A0A140LI04 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5890A0A140LI04 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5890A0A140LI04 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gm5890A0A140LI04 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5890A0A140LI04 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5890A0A140LI04 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5890A0A140LI04 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5890A0A140LI04 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5890A0A140LI04 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Gm5890A0A140LI04 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5890A0A140LI04 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5890A0A140LI04 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.14■□□□□ 0.65
Gm5890A0A140LI04 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm5890A0A140LI04 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5890A0A140LI04 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5890A0A140LI04 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5890A0A140LI04 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5890A0A140LI04 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5890A0A140LI04 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Gm5890A0A140LI04 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5890A0A140LI04 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5890A0A140LI04 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.11■□□□□ 0.65
Gm5890A0A140LI04 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Gm5890A0A140LI04 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5890A0A140LI04 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.11■□□□□ 0.65
Gm5890A0A140LI04 Gm26115-201ENSMUST00000175605 87 ntBASIC19.11■□□□□ 0.65
Gm5890A0A140LI04 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gm5890A0A140LI04 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5890A0A140LI04 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5890A0A140LI04 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5890A0A140LI04 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5890A0A140LI04 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Gm5890A0A140LI04 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5890A0A140LI04 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5890A0A140LI04 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5890A0A140LI04 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm5890A0A140LI04 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms