Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-27A0A0G2JF28 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-27A0A0G2JF28 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-27A0A0G2JF28 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-27A0A0G2JF28 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-27A0A0G2JF28 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-27A0A0G2JF28 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-27A0A0G2JF28 AC122428.3-201ENSMUST00000215551 2290 ntBASIC14.97□□□□□ -0.01
Igkv8-27A0A0G2JF28 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Igkv8-27A0A0G2JF28 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Igkv8-27A0A0G2JF28 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Igkv8-27A0A0G2JF28 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv8-27A0A0G2JF28 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-27A0A0G2JF28 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.93□□□□□ -0.02
Igkv8-27A0A0G2JF28 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-27A0A0G2JF28 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC14.93□□□□□ -0.02
Igkv8-27A0A0G2JF28 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-27A0A0G2JF28 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-27A0A0G2JF28 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.93□□□□□ -0.02
Igkv8-27A0A0G2JF28 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-27A0A0G2JF28 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.92□□□□□ -0.02
Igkv8-27A0A0G2JF28 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-27A0A0G2JF28 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Igkv8-27A0A0G2JF28 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv8-27A0A0G2JF28 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Igkv8-27A0A0G2JF28 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Igkv8-27A0A0G2JF28 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Igkv8-27A0A0G2JF28 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv8-27A0A0G2JF28 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv8-27A0A0G2JF28 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Igkv8-27A0A0G2JF28 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.9□□□□□ -0.02
Igkv8-27A0A0G2JF28 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv8-27A0A0G2JF28 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Igkv8-27A0A0G2JF28 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv8-27A0A0G2JF28 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv8-27A0A0G2JF28 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-27A0A0G2JF28 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-27A0A0G2JF28 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-27A0A0G2JF28 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Igkv8-27A0A0G2JF28 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.87□□□□□ -0.03
Igkv8-27A0A0G2JF28 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-27A0A0G2JF28 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Igkv8-27A0A0G2JF28 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Igkv8-27A0A0G2JF28 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv8-27A0A0G2JF28 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Igkv8-27A0A0G2JF28 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv8-27A0A0G2JF28 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Igkv8-27A0A0G2JF28 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv8-27A0A0G2JF28 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.84□□□□□ -0.03
Igkv8-27A0A0G2JF28 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv8-27A0A0G2JF28 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igkv8-27A0A0G2JF28 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-27A0A0G2JF28 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Igkv8-27A0A0G2JF28 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-27A0A0G2JF28 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-27A0A0G2JF28 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-27A0A0G2JF28 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-27A0A0G2JF28 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv8-27A0A0G2JF28 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv8-27A0A0G2JF28 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv8-27A0A0G2JF28 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-27A0A0G2JF28 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-27A0A0G2JF28 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-27A0A0G2JF28 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-27A0A0G2JF28 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-27A0A0G2JF28 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC14.8□□□□□ -0.04
Igkv8-27A0A0G2JF28 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-27A0A0G2JF28 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-27A0A0G2JF28 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-27A0A0G2JF28 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv8-27A0A0G2JF28 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv8-27A0A0G2JF28 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv8-27A0A0G2JF28 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-27A0A0G2JF28 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms