Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trbv30A0A0B4J1P1 Amer2-203ENSMUST00000225247 2662 ntBASIC17.97■□□□□ 0.47
Trbv30A0A0B4J1P1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv30A0A0B4J1P1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trbv30A0A0B4J1P1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trbv30A0A0B4J1P1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv30A0A0B4J1P1 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.95■□□□□ 0.46
Trbv30A0A0B4J1P1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv30A0A0B4J1P1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv30A0A0B4J1P1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv30A0A0B4J1P1 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.93■□□□□ 0.46
Trbv30A0A0B4J1P1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Trbv30A0A0B4J1P1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv30A0A0B4J1P1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbv30A0A0B4J1P1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv30A0A0B4J1P1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv30A0A0B4J1P1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trbv30A0A0B4J1P1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv30A0A0B4J1P1 Nkain2-201ENSMUST00000092602 558 ntBASIC17.91■□□□□ 0.46
Trbv30A0A0B4J1P1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv30A0A0B4J1P1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv30A0A0B4J1P1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv30A0A0B4J1P1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trbv30A0A0B4J1P1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trbv30A0A0B4J1P1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv30A0A0B4J1P1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv30A0A0B4J1P1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
Trbv30A0A0B4J1P1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.88■□□□□ 0.45
Trbv30A0A0B4J1P1 Gm6821-201ENSMUST00000107540 542 ntBASIC17.88■□□□□ 0.45
Trbv30A0A0B4J1P1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbv30A0A0B4J1P1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.88■□□□□ 0.45
Trbv30A0A0B4J1P1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv30A0A0B4J1P1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv30A0A0B4J1P1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv30A0A0B4J1P1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trbv30A0A0B4J1P1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Trbv30A0A0B4J1P1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv30A0A0B4J1P1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv30A0A0B4J1P1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv30A0A0B4J1P1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv30A0A0B4J1P1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv30A0A0B4J1P1 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.84■□□□□ 0.45
Trbv30A0A0B4J1P1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trbv30A0A0B4J1P1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv30A0A0B4J1P1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.83■□□□□ 0.44
Trbv30A0A0B4J1P1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv30A0A0B4J1P1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv30A0A0B4J1P1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv30A0A0B4J1P1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv30A0A0B4J1P1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv30A0A0B4J1P1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv30A0A0B4J1P1 Gm30023-201ENSMUST00000197970 889 ntBASIC17.81■□□□□ 0.44
Trbv30A0A0B4J1P1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv30A0A0B4J1P1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv30A0A0B4J1P1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv30A0A0B4J1P1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trbv30A0A0B4J1P1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv30A0A0B4J1P1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv30A0A0B4J1P1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Trbv30A0A0B4J1P1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv30A0A0B4J1P1 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.8■□□□□ 0.44
Trbv30A0A0B4J1P1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv30A0A0B4J1P1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv30A0A0B4J1P1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv30A0A0B4J1P1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv30A0A0B4J1P1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv30A0A0B4J1P1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv30A0A0B4J1P1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trbv30A0A0B4J1P1 Gm8503-201ENSMUST00000118131 455 ntBASIC17.77■□□□□ 0.44
Trbv30A0A0B4J1P1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.76■□□□□ 0.43
Trbv30A0A0B4J1P1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv30A0A0B4J1P1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv30A0A0B4J1P1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.73■□□□□ 0.43
Trbv30A0A0B4J1P1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.73■□□□□ 0.43
Trbv30A0A0B4J1P1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.73■□□□□ 0.43
Trbv30A0A0B4J1P1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Trbv30A0A0B4J1P1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv30A0A0B4J1P1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv30A0A0B4J1P1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv30A0A0B4J1P1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv30A0A0B4J1P1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv30A0A0B4J1P1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv30A0A0B4J1P1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv30A0A0B4J1P1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv30A0A0B4J1P1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv30A0A0B4J1P1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.7■□□□□ 0.42
Trbv30A0A0B4J1P1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms