Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ighv1-12A0A0A6YXJ9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.87■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.86■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.86■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.84■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-12A0A0A6YXJ9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.83■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Gm30023-201ENSMUST00000197970 889 ntBASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.78■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.78■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-12A0A0A6YXJ9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.75■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.74■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Nkain2-201ENSMUST00000092602 558 ntBASIC17.74■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.71■□□□□ 0.43
Ighv1-12A0A0A6YXJ9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-12A0A0A6YXJ9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms