Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Nkain2-201ENSMUST00000092602 558 ntBASIC18.24■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.24■□□□□ 0.51
Ighv1-52A0A0A6YXC3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.23■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-52A0A0A6YXC3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-52A0A0A6YXC3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-52A0A0A6YXC3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.21■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.2■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.18■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Gm6821-201ENSMUST00000107540 542 ntBASIC18.17■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.17■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.15■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Gm30023-201ENSMUST00000197970 889 ntBASIC18.15■□□□□ 0.5
Ighv1-52A0A0A6YXC3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.14■□□□□ 0.5
Ighv1-52A0A0A6YXC3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ighv1-52A0A0A6YXC3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-52A0A0A6YXC3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Gm8503-201ENSMUST00000118131 455 ntBASIC18.11■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Ighv1-52A0A0A6YXC3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-52A0A0A6YXC3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ighv1-52A0A0A6YXC3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.07■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.06■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.06■□□□□ 0.48
Ighv1-52A0A0A6YXC3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.03■□□□□ 0.48
Ighv1-52A0A0A6YXC3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.03■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.03■□□□□ 0.48
Ighv1-52A0A0A6YXC3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-52A0A0A6YXC3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.01■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.01■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.01■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-52A0A0A6YXC3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.99■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.99■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms