Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv6-4A0A0A6YX19 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.9■□□□□ 0.62
Ighv6-4A0A0A6YX19 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv6-4A0A0A6YX19 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv6-4A0A0A6YX19 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv6-4A0A0A6YX19 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv6-4A0A0A6YX19 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv6-4A0A0A6YX19 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv6-4A0A0A6YX19 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ighv6-4A0A0A6YX19 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Ighv6-4A0A0A6YX19 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv6-4A0A0A6YX19 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ighv6-4A0A0A6YX19 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ighv6-4A0A0A6YX19 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Ighv6-4A0A0A6YX19 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv6-4A0A0A6YX19 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv6-4A0A0A6YX19 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ighv6-4A0A0A6YX19 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Ighv6-4A0A0A6YX19 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv6-4A0A0A6YX19 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv6-4A0A0A6YX19 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv6-4A0A0A6YX19 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
Ighv6-4A0A0A6YX19 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv6-4A0A0A6YX19 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv6-4A0A0A6YX19 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.82■□□□□ 0.6
Ighv6-4A0A0A6YX19 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv6-4A0A0A6YX19 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv6-4A0A0A6YX19 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv6-4A0A0A6YX19 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv6-4A0A0A6YX19 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ighv6-4A0A0A6YX19 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv6-4A0A0A6YX19 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ighv6-4A0A0A6YX19 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.81■□□□□ 0.6
Ighv6-4A0A0A6YX19 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv6-4A0A0A6YX19 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.8■□□□□ 0.6
Ighv6-4A0A0A6YX19 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv6-4A0A0A6YX19 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ighv6-4A0A0A6YX19 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv6-4A0A0A6YX19 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv6-4A0A0A6YX19 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Ighv6-4A0A0A6YX19 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv6-4A0A0A6YX19 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv6-4A0A0A6YX19 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv6-4A0A0A6YX19 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv6-4A0A0A6YX19 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv6-4A0A0A6YX19 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ighv6-4A0A0A6YX19 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv6-4A0A0A6YX19 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv6-4A0A0A6YX19 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv6-4A0A0A6YX19 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ighv6-4A0A0A6YX19 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv6-4A0A0A6YX19 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv6-4A0A0A6YX19 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv6-4A0A0A6YX19 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv6-4A0A0A6YX19 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv6-4A0A0A6YX19 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ighv6-4A0A0A6YX19 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ighv6-4A0A0A6YX19 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv6-4A0A0A6YX19 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv6-4A0A0A6YX19 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv6-4A0A0A6YX19 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv6-4A0A0A6YX19 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv6-4A0A0A6YX19 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv6-4A0A0A6YX19 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv6-4A0A0A6YX19 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv6-4A0A0A6YX19 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv6-4A0A0A6YX19 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv6-4A0A0A6YX19 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv6-4A0A0A6YX19 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ighv6-4A0A0A6YX19 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv6-4A0A0A6YX19 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv6-4A0A0A6YX19 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv6-4A0A0A6YX19 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv6-4A0A0A6YX19 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv6-4A0A0A6YX19 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv6-4A0A0A6YX19 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv6-4A0A0A6YX19 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv6-4A0A0A6YX19 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv6-4A0A0A6YX19 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms