Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm28897A0A087WP44 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28897A0A087WP44 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28897A0A087WP44 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28897A0A087WP44 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm28897A0A087WP44 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28897A0A087WP44 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28897A0A087WP44 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28897A0A087WP44 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28897A0A087WP44 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28897A0A087WP44 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28897A0A087WP44 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28897A0A087WP44 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Gm28897A0A087WP44 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28897A0A087WP44 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28897A0A087WP44 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28897A0A087WP44 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28897A0A087WP44 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28897A0A087WP44 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28897A0A087WP44 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm28897A0A087WP44 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Gm28897A0A087WP44 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28897A0A087WP44 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28897A0A087WP44 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Gm28897A0A087WP44 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.92■□□□□ 0.94
Gm28897A0A087WP44 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28897A0A087WP44 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm28897A0A087WP44 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28897A0A087WP44 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28897A0A087WP44 Peli2-204ENSMUST00000226513 1320 ntBASIC20.91■□□□□ 0.94
Gm28897A0A087WP44 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28897A0A087WP44 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28897A0A087WP44 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm28897A0A087WP44 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm28897A0A087WP44 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28897A0A087WP44 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28897A0A087WP44 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28897A0A087WP44 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28897A0A087WP44 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28897A0A087WP44 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28897A0A087WP44 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28897A0A087WP44 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28897A0A087WP44 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28897A0A087WP44 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28897A0A087WP44 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.86■□□□□ 0.93
Gm28897A0A087WP44 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28897A0A087WP44 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28897A0A087WP44 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28897A0A087WP44 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.86■□□□□ 0.93
Gm28897A0A087WP44 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28897A0A087WP44 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Gm28897A0A087WP44 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm28897A0A087WP44 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Gm28897A0A087WP44 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28897A0A087WP44 Gm26115-201ENSMUST00000175605 87 ntBASIC20.84■□□□□ 0.93
Gm28897A0A087WP44 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28897A0A087WP44 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28897A0A087WP44 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28897A0A087WP44 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Gm28897A0A087WP44 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28897A0A087WP44 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28897A0A087WP44 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28897A0A087WP44 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Gm28897A0A087WP44 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Gm28897A0A087WP44 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28897A0A087WP44 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm28897A0A087WP44 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Gm28897A0A087WP44 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm28897A0A087WP44 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28897A0A087WP44 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28897A0A087WP44 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28897A0A087WP44 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28897A0A087WP44 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28897A0A087WP44 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28897A0A087WP44 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm28897A0A087WP44 Gm8109-201ENSMUST00000194076 746 ntBASIC20.76■□□□□ 0.91
Gm28897A0A087WP44 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Gm28897A0A087WP44 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm28897A0A087WP44 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28897A0A087WP44 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28897A0A087WP44 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28897A0A087WP44 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm28897A0A087WP44 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28897A0A087WP44 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28897A0A087WP44 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm28897A0A087WP44 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28897A0A087WP44 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm28897A0A087WP44 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28897A0A087WP44 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28897A0A087WP44 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28897A0A087WP44 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm28897A0A087WP44 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28897A0A087WP44 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28897A0A087WP44 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms