Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav8n-2A0A075B633 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav8n-2A0A075B633 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Trav8n-2A0A075B633 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav8n-2A0A075B633 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.3■■□□□ 1.16
Trav8n-2A0A075B633 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav8n-2A0A075B633 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trav8n-2A0A075B633 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.28■■□□□ 1.16
Trav8n-2A0A075B633 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.27■■□□□ 1.16
Trav8n-2A0A075B633 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trav8n-2A0A075B633 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav8n-2A0A075B633 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trav8n-2A0A075B633 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Trav8n-2A0A075B633 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav8n-2A0A075B633 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.25■■□□□ 1.15
Trav8n-2A0A075B633 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav8n-2A0A075B633 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav8n-2A0A075B633 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav8n-2A0A075B633 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Trav8n-2A0A075B633 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Trav8n-2A0A075B633 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.23■■□□□ 1.15
Trav8n-2A0A075B633 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trav8n-2A0A075B633 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.21■■□□□ 1.15
Trav8n-2A0A075B633 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trav8n-2A0A075B633 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trav8n-2A0A075B633 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trav8n-2A0A075B633 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.2■■□□□ 1.14
Trav8n-2A0A075B633 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.19■■□□□ 1.14
Trav8n-2A0A075B633 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav8n-2A0A075B633 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trav8n-2A0A075B633 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav8n-2A0A075B633 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Trav8n-2A0A075B633 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav8n-2A0A075B633 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav8n-2A0A075B633 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.17■■□□□ 1.14
Trav8n-2A0A075B633 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav8n-2A0A075B633 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav8n-2A0A075B633 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trav8n-2A0A075B633 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Trav8n-2A0A075B633 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav8n-2A0A075B633 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav8n-2A0A075B633 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav8n-2A0A075B633 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trav8n-2A0A075B633 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav8n-2A0A075B633 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav8n-2A0A075B633 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trav8n-2A0A075B633 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.14■■□□□ 1.13
Trav8n-2A0A075B633 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Trav8n-2A0A075B633 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav8n-2A0A075B633 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav8n-2A0A075B633 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.13■■□□□ 1.13
Trav8n-2A0A075B633 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.12■■□□□ 1.13
Trav8n-2A0A075B633 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Trav8n-2A0A075B633 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav8n-2A0A075B633 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav8n-2A0A075B633 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav8n-2A0A075B633 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav8n-2A0A075B633 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.11■■□□□ 1.13
Trav8n-2A0A075B633 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
Trav8n-2A0A075B633 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.11■■□□□ 1.13
Trav8n-2A0A075B633 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav8n-2A0A075B633 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav8n-2A0A075B633 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trav8n-2A0A075B633 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav8n-2A0A075B633 Gm11687-201ENSMUST00000118911 886 ntBASIC22.09■■□□□ 1.13
Trav8n-2A0A075B633 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav8n-2A0A075B633 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav8n-2A0A075B633 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trav8n-2A0A075B633 Scarna2-201ENSMUST00000157560 414 ntBASIC22.08■■□□□ 1.13
Trav8n-2A0A075B633 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Trav8n-2A0A075B633 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav8n-2A0A075B633 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav8n-2A0A075B633 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav8n-2A0A075B633 Gm9806-201ENSMUST00000051080 552 ntBASIC22.06■■□□□ 1.12
Trav8n-2A0A075B633 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.06■■□□□ 1.12
Trav8n-2A0A075B633 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trav8n-2A0A075B633 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav8n-2A0A075B633 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav8n-2A0A075B633 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav8n-2A0A075B633 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.05■■□□□ 1.12
Trav8n-2A0A075B633 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trav8n-2A0A075B633 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav8n-2A0A075B633 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav8n-2A0A075B633 Gm4799-201ENSMUST00000095396 657 ntBASIC22.04■■□□□ 1.12
Trav8n-2A0A075B633 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trav8n-2A0A075B633 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav8n-2A0A075B633 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.02■■□□□ 1.12
Trav8n-2A0A075B633 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trav8n-2A0A075B633 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.01■■□□□ 1.11
Trav8n-2A0A075B633 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav8n-2A0A075B633 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav8n-2A0A075B633 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.99■■□□□ 1.11
Trav8n-2A0A075B633 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav8n-2A0A075B633 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav8n-2A0A075B633 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.97■■□□□ 1.11
Trav8n-2A0A075B633 Mir3960-201ENSMUST00000198213 73 ntBASIC21.97■■□□□ 1.11
Trav8n-2A0A075B633 Gm16437-201ENSMUST00000025669 507 ntBASIC21.97■■□□□ 1.11
Trav8n-2A0A075B633 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav8n-2A0A075B633 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.96■■□□□ 1.11
Trav8n-2A0A075B633 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms