Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.66■■□□□ 1.06
Trav12n-2A0A075B626 Gm6821-201ENSMUST00000107540 542 ntBASIC21.65■■□□□ 1.06
Trav12n-2A0A075B626 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trav12n-2A0A075B626 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
Trav12n-2A0A075B626 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.63■■□□□ 1.05
Trav12n-2A0A075B626 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Trav12n-2A0A075B626 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trav12n-2A0A075B626 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav12n-2A0A075B626 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trav12n-2A0A075B626 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav12n-2A0A075B626 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav12n-2A0A075B626 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav12n-2A0A075B626 Gm30023-201ENSMUST00000197970 889 ntBASIC21.61■■□□□ 1.05
Trav12n-2A0A075B626 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav12n-2A0A075B626 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav12n-2A0A075B626 Gm8503-201ENSMUST00000118131 455 ntBASIC21.59■■□□□ 1.05
Trav12n-2A0A075B626 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav12n-2A0A075B626 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav12n-2A0A075B626 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trav12n-2A0A075B626 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Trav12n-2A0A075B626 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trav12n-2A0A075B626 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Trav12n-2A0A075B626 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.57■■□□□ 1.04
Trav12n-2A0A075B626 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trav12n-2A0A075B626 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trav12n-2A0A075B626 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav12n-2A0A075B626 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trav12n-2A0A075B626 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav12n-2A0A075B626 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav12n-2A0A075B626 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav12n-2A0A075B626 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.55■■□□□ 1.04
Trav12n-2A0A075B626 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav12n-2A0A075B626 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav12n-2A0A075B626 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav12n-2A0A075B626 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav12n-2A0A075B626 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav12n-2A0A075B626 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav12n-2A0A075B626 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.53■■□□□ 1.04
Trav12n-2A0A075B626 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav12n-2A0A075B626 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.52■■□□□ 1.04
Trav12n-2A0A075B626 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Trav12n-2A0A075B626 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav12n-2A0A075B626 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trav12n-2A0A075B626 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.51■■□□□ 1.03
Trav12n-2A0A075B626 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav12n-2A0A075B626 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.5■■□□□ 1.03
Trav12n-2A0A075B626 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav12n-2A0A075B626 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav12n-2A0A075B626 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.5■■□□□ 1.03
Trav12n-2A0A075B626 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav12n-2A0A075B626 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav12n-2A0A075B626 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.49■■□□□ 1.03
Trav12n-2A0A075B626 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav12n-2A0A075B626 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trav12n-2A0A075B626 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Trav12n-2A0A075B626 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav12n-2A0A075B626 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav12n-2A0A075B626 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trav12n-2A0A075B626 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav12n-2A0A075B626 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trav12n-2A0A075B626 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trav12n-2A0A075B626 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav12n-2A0A075B626 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav12n-2A0A075B626 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.46■■□□□ 1.03
Trav12n-2A0A075B626 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav12n-2A0A075B626 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.45■■□□□ 1.02
Trav12n-2A0A075B626 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trav12n-2A0A075B626 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav12n-2A0A075B626 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav12n-2A0A075B626 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trav12n-2A0A075B626 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.43■■□□□ 1.02
Trav12n-2A0A075B626 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Trav12n-2A0A075B626 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.42■■□□□ 1.02
Trav12n-2A0A075B626 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.41■■□□□ 1.02
Trav12n-2A0A075B626 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trav12n-2A0A075B626 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav12n-2A0A075B626 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav12n-2A0A075B626 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav12n-2A0A075B626 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.39■■□□□ 1.02
Trav12n-2A0A075B626 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trav12n-2A0A075B626 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.39■■□□□ 1.02
Trav12n-2A0A075B626 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.39■■□□□ 1.01
Trav12n-2A0A075B626 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav12n-2A0A075B626 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Trav12n-2A0A075B626 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav12n-2A0A075B626 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav12n-2A0A075B626 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.38■■□□□ 1.01
Trav12n-2A0A075B626 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav12n-2A0A075B626 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav12n-2A0A075B626 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.36■■□□□ 1.01
Trav12n-2A0A075B626 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav12n-2A0A075B626 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav12n-2A0A075B626 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Trav12n-2A0A075B626 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trav12n-2A0A075B626 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav12n-2A0A075B626 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trav12n-2A0A075B626 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav12n-2A0A075B626 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav12n-2A0A075B626 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trav12n-2A0A075B626 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms