Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-55A0A075B5W6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-55A0A075B5W6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.92■□□□□ 0.62
Ighv1-55A0A075B5W6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-55A0A075B5W6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-55A0A075B5W6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.91■□□□□ 0.62
Ighv1-55A0A075B5W6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-55A0A075B5W6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ighv1-55A0A075B5W6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-55A0A075B5W6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ighv1-55A0A075B5W6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-55A0A075B5W6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-55A0A075B5W6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.89■□□□□ 0.61
Ighv1-55A0A075B5W6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-55A0A075B5W6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-55A0A075B5W6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.88■□□□□ 0.61
Ighv1-55A0A075B5W6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-55A0A075B5W6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-55A0A075B5W6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-55A0A075B5W6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-55A0A075B5W6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-55A0A075B5W6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-55A0A075B5W6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.85■□□□□ 0.61
Ighv1-55A0A075B5W6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-55A0A075B5W6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.85■□□□□ 0.61
Ighv1-55A0A075B5W6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-55A0A075B5W6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ighv1-55A0A075B5W6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-55A0A075B5W6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-55A0A075B5W6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-55A0A075B5W6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-55A0A075B5W6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-55A0A075B5W6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-55A0A075B5W6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-55A0A075B5W6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.82■□□□□ 0.6
Ighv1-55A0A075B5W6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-55A0A075B5W6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.82■□□□□ 0.6
Ighv1-55A0A075B5W6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.82■□□□□ 0.6
Ighv1-55A0A075B5W6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-55A0A075B5W6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Ighv1-55A0A075B5W6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ighv1-55A0A075B5W6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.81■□□□□ 0.6
Ighv1-55A0A075B5W6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-55A0A075B5W6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-55A0A075B5W6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-55A0A075B5W6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv1-55A0A075B5W6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-55A0A075B5W6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ighv1-55A0A075B5W6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-55A0A075B5W6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-55A0A075B5W6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ighv1-55A0A075B5W6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-55A0A075B5W6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.77■□□□□ 0.6
Ighv1-55A0A075B5W6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-55A0A075B5W6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ighv1-55A0A075B5W6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ighv1-55A0A075B5W6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ighv1-55A0A075B5W6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-55A0A075B5W6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ighv1-55A0A075B5W6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ighv1-55A0A075B5W6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-55A0A075B5W6 Nkain2-201ENSMUST00000092602 558 ntBASIC18.74■□□□□ 0.59
Ighv1-55A0A075B5W6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-55A0A075B5W6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-55A0A075B5W6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-55A0A075B5W6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-55A0A075B5W6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Ighv1-55A0A075B5W6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-55A0A075B5W6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ighv1-55A0A075B5W6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-55A0A075B5W6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Ighv1-55A0A075B5W6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-55A0A075B5W6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ighv1-55A0A075B5W6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-55A0A075B5W6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-55A0A075B5W6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv1-55A0A075B5W6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-55A0A075B5W6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-55A0A075B5W6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ighv1-55A0A075B5W6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-55A0A075B5W6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv1-55A0A075B5W6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-55A0A075B5W6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.68■□□□□ 0.58
Ighv1-55A0A075B5W6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-55A0A075B5W6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-55A0A075B5W6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-55A0A075B5W6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms