Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm22113-201ENSMUST00000158343 104 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Mir6335-201ENSMUST00000184081 98 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm27818-201ENSMUST00000184536 159 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm27355-201ENSMUST00000185045 128 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm28957-201ENSMUST00000190174 373 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm9402-201ENSMUST00000196849 388 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm42925-201ENSMUST00000197359 285 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Mir6994-201ENSMUST00000198985 73 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm35931-201ENSMUST00000203931 448 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm44157-201ENSMUST00000204720 410 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm11894-201ENSMUST00000121579 328 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm26001-201ENSMUST00000157989 103 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm16378-201ENSMUST00000179168 342 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm27997-201ENSMUST00000184942 69 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm28534-201ENSMUST00000187744 676 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm20203-201ENSMUST00000192352 332 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm37601-201ENSMUST00000194922 394 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm29704-201ENSMUST00000196011 253 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm18306-201ENSMUST00000207338 569 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm5265-201ENSMUST00000076828 342 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.94□□□□□ -1.62
Ubp1Q811S7 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubp1Q811S7 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm12808-201ENSMUST00000120597 404 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm22107-201ENSMUST00000122548 100 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm24839-201ENSMUST00000122602 107 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm23258-201ENSMUST00000158319 106 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm25121-201ENSMUST00000179846 79 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm7871-201ENSMUST00000195346 618 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm7041-201ENSMUST00000201227 524 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm43415-201ENSMUST00000201934 750 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm43925-201ENSMUST00000203498 206 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm2011-203ENSMUST00000203750 435 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm44881-201ENSMUST00000205425 367 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm10916-201ENSMUST00000080330 483 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Gm22741-201ENSMUST00000083438 165 ntBASIC4.93□□□□□ -1.62
Ubp1Q811S7 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubp1Q811S7 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ubp1Q811S7 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Ubp1Q811S7 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.92□□□□□ -1.62
Ubp1Q811S7 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ubp1Q811S7 Gm25419-201ENSMUST00000104215 191 ntBASIC4.92□□□□□ -1.62
Ubp1Q811S7 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 207.3 ms