Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Gm15375-201ENSMUST00000119510 849 ntBASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf1aP25118 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Gm11643-201ENSMUST00000119578 864 ntBASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Mir8112-201ENSMUST00000184382 131 ntBASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1aP25118 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1aP25118 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Tnfrsf1aP25118 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm11249-201ENSMUST00000117071 859 ntBASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm13158-201ENSMUST00000122007 736 ntBASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.45□□□□□ -0.1
Tnfrsf1aP25118 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Gm13401-201ENSMUST00000117074 291 ntBASIC14.44□□□□□ -0.1
Tnfrsf1aP25118 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms