Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf235Q61116 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf235Q61116 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Znf235Q61116 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf235Q61116 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Znf235Q61116 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.14■□□□□ 0.49
Znf235Q61116 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Znf235Q61116 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Znf235Q61116 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Znf235Q61116 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Znf235Q61116 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Znf235Q61116 Gm8969-201ENSMUST00000199694 526 ntBASIC18.14■□□□□ 0.49
Znf235Q61116 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.14■□□□□ 0.49
Znf235Q61116 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.14■□□□□ 0.49
Znf235Q61116 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Znf235Q61116 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Znf235Q61116 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.13■□□□□ 0.49
Znf235Q61116 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.13■□□□□ 0.49
Znf235Q61116 Gm33142-201ENSMUST00000193913 867 ntBASIC18.13■□□□□ 0.49
Znf235Q61116 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.13■□□□□ 0.49
Znf235Q61116 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Znf235Q61116 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.13■□□□□ 0.49
Znf235Q61116 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.12■□□□□ 0.49
Znf235Q61116 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.12■□□□□ 0.49
Znf235Q61116 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Znf235Q61116 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.12■□□□□ 0.49
Znf235Q61116 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Znf235Q61116 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Znf235Q61116 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.12■□□□□ 0.49
Znf235Q61116 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Znf235Q61116 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Znf235Q61116 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.11■□□□□ 0.49
Znf235Q61116 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.11■□□□□ 0.49
Znf235Q61116 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Znf235Q61116 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Znf235Q61116 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Znf235Q61116 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.1■□□□□ 0.49
Znf235Q61116 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Znf235Q61116 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Gm9013-201ENSMUST00000132939 882 ntBASIC18.1■□□□□ 0.49
Znf235Q61116 Gm25016-201ENSMUST00000158399 131 ntBASIC18.1■□□□□ 0.49
Znf235Q61116 Gm18958-201ENSMUST00000174258 762 ntBASIC18.1■□□□□ 0.49
Znf235Q61116 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Gm10819-201ENSMUST00000099988 561 ntBASIC18.1■□□□□ 0.49
Znf235Q61116 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.1■□□□□ 0.49
Znf235Q61116 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Znf235Q61116 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.09■□□□□ 0.49
Znf235Q61116 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Znf235Q61116 Gm11355-201ENSMUST00000121120 306 ntBASIC18.09■□□□□ 0.49
Znf235Q61116 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.09■□□□□ 0.49
Znf235Q61116 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Znf235Q61116 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Znf235Q61116 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Znf235Q61116 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms