Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.39■□□□□ 0.37
Pfdn6Q03958 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.39■□□□□ 0.37
Pfdn6Q03958 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.39■□□□□ 0.37
Pfdn6Q03958 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Gm27275-201ENSMUST00000184318 272 ntBASIC17.38■□□□□ 0.37
Pfdn6Q03958 Trmt13-210ENSMUST00000198454 880 ntBASIC17.38■□□□□ 0.37
Pfdn6Q03958 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.38■□□□□ 0.37
Pfdn6Q03958 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.38■□□□□ 0.37
Pfdn6Q03958 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.38■□□□□ 0.37
Pfdn6Q03958 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.37■□□□□ 0.37
Pfdn6Q03958 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.37■□□□□ 0.37
Pfdn6Q03958 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn6Q03958 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.36■□□□□ 0.37
Pfdn6Q03958 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.36■□□□□ 0.37
Pfdn6Q03958 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn6Q03958 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Gm6576-201ENSMUST00000169678 883 ntBASIC17.35■□□□□ 0.37
Pfdn6Q03958 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn6Q03958 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn6Q03958 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn6Q03958 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn6Q03958 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pfdn6Q03958 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn6Q03958 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms