Protein–RNA interactions for Protein: P38780

YHR054C, Uncharacterized protein YHR054C, yeastyeast

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR054CP38780 YNL277W-AYNL277W-A 189 nt1.05□□□□□ -2.24
YHR054CP38780 KAP120YPL125W 3099 nt1.05□□□□□ -2.24
YHR054CP38780 RAD61YDR014W 1944 nt1.05□□□□□ -2.24
YHR054CP38780 YNL028WYNL028W 318 nt1.04□□□□□ -2.24
YHR054CP38780 OLI1Q0130 231 nt1.03□□□□□ -2.24
YHR054CP38780 YOR015WYOR015W 360 nt1.03□□□□□ -2.24
YHR054CP38780 IES4YOR189W 351 nt1.03□□□□□ -2.24
YHR054CP38780 YOR218CYOR218C 420 nt1.03□□□□□ -2.24
YHR054CP38780 YOR231C-AYOR231C-A 201 nt1.03□□□□□ -2.24
YHR054CP38780 MCM10YIL150C 1716 nt1.03□□□□□ -2.24
YHR054CP38780 GEA2YEL022W 4380 nt1.02□□□□□ -2.25
YHR054CP38780 YGR069WYGR069W 336 nt1.02□□□□□ -2.25
YHR054CP38780 YLR120W-AYLR120W-A 102 nt1.01□□□□□ -2.25
YHR054CP38780 RPS30BYOR182C 192 nt1.01□□□□□ -2.25
YHR054CP38780 SGF11YPL047W 300 nt1.01□□□□□ -2.25
YHR054CP38780 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
YHR054CP38780 YEL020C-BYEL020C-B 198 nt1□□□□□ -2.25
YHR054CP38780 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
YHR054CP38780 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
YHR054CP38780 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
YHR054CP38780 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
YHR054CP38780 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
YHR054CP38780 PAM16YJL104W 450 nt0.99□□□□□ -2.25
YHR054CP38780 YMR172C-AYMR172C-A 384 nt0.99□□□□□ -2.25
YHR054CP38780 CMC4YMR194C-B 222 nt0.99□□□□□ -2.25
YHR054CP38780 YOR008C-AYOR008C-A 225 nt0.99□□□□□ -2.25
YHR054CP38780 SMC1YFL008W 3678 nt0.99□□□□□ -2.25
YHR054CP38780 YNL211CYNL211C 261 nt0.98□□□□□ -2.25
YHR054CP38780 YDL073WYDL073W 2955 nt0.97□□□□□ -2.25
YHR054CP38780 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
YHR054CP38780 YDL196WYDL196W 330 nt0.97□□□□□ -2.25
YHR054CP38780 ISD11YER048W-A 285 nt0.97□□□□□ -2.25
YHR054CP38780 NOP9YJL010C 2001 nt0.97□□□□□ -2.25
YHR054CP38780 PRP16YKR086W 3216 nt0.97□□□□□ -2.25
YHR054CP38780 BEM2YER155C 6504 nt0.97□□□□□ -2.25
YHR054CP38780 YDR354C-AYDR354C-A 144 nt0.96□□□□□ -2.26
YHR054CP38780 YJL197C-AYJL197C-A 282 nt0.96□□□□□ -2.26
YHR054CP38780 YGL052WYGL052W 306 nt0.95□□□□□ -2.26
YHR054CP38780 YIL142C-AYIL142C-A 333 nt0.95□□□□□ -2.26
YHR054CP38780 ASE1YOR058C 2658 nt0.95□□□□□ -2.26
YHR054CP38780 YER181CYER181C 324 nt0.94□□□□□ -2.26
YHR054CP38780 BUD3YCL014W 4911 nt0.93□□□□□ -2.26
YHR054CP38780 YPL044CYPL044C 549 nt0.93□□□□□ -2.26
YHR054CP38780 PAU24YBR301W 363 nt0.93□□□□□ -2.26
YHR054CP38780 BFR2YDR299W 1605 nt0.93□□□□□ -2.26
YHR054CP38780 PAA1YDR071C 576 nt0.92□□□□□ -2.26
YHR054CP38780 YFR012W-AYFR012W-A 87 nt0.92□□□□□ -2.26
YHR054CP38780 YJL026C-AYJL026C-A 222 nt0.92□□□□□ -2.26
YHR054CP38780 YOR282WYOR282W 321 nt0.92□□□□□ -2.26
YHR054CP38780 YPR092WYPR092W 306 nt0.92□□□□□ -2.26
YHR054CP38780 YAL067W-AYAL067W-A 228 nt0.91□□□□□ -2.26
YHR054CP38780 YPL152W-AYPL152W-A 99 nt0.91□□□□□ -2.26
YHR054CP38780 UTP20YBL004W 7482 nt0.9□□□□□ -2.27
YHR054CP38780 PMP1YCR024C-A 123 nt0.9□□□□□ -2.27
YHR054CP38780 snR74snR74 88 nt0.9□□□□□ -2.27
YHR054CP38780 YLL019W-AYLL019W-A 93 nt0.9□□□□□ -2.27
YHR054CP38780 YDL185C-AYDL185C-A 228 nt0.88□□□□□ -2.27
YHR054CP38780 RPL26BYGR034W 384 nt0.87□□□□□ -2.27
YHR054CP38780 YML099W-AYML099W-A 330 nt0.87□□□□□ -2.27
YHR054CP38780 YOR072W-BYOR072W-B 162 nt0.87□□□□□ -2.27
YHR054CP38780 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
YHR054CP38780 tF(GAA)QtF(GAA)Q 75 nt0.84□□□□□ -2.27
YHR054CP38780 snR49snR49 165 nt0.84□□□□□ -2.27
YHR054CP38780 DOP1YDR141C 5097 nt0.84□□□□□ -2.28
YHR054CP38780 YMR307C-AYMR307C-A 195 nt0.83□□□□□ -2.28
YHR054CP38780 YCR018C-AYCR018C-A 255 nt0.82□□□□□ -2.28
YHR054CP38780 YHR063W-AYHR063W-A 336 nt0.82□□□□□ -2.28
YHR054CP38780 YMR160WYMR160W 2451 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)BtF(GAA)B 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)FtF(GAA)F 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)GtF(GAA)G 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)H1tF(GAA)H1 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)H2tF(GAA)H2 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)MtF(GAA)M 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)P1tF(GAA)P1 73 nt0.81□□□□□ -2.28
YHR054CP38780 tF(GAA)P2tF(GAA)P2 73 nt0.81□□□□□ -2.28
YHR054CP38780 YIR030W-AYIR030W-A 384 nt0.81□□□□□ -2.28
YHR054CP38780 snR190snR190 190 nt0.81□□□□□ -2.28
YHR054CP38780 COY1YKL179C 2040 nt0.81□□□□□ -2.28
YHR054CP38780 snR55snR55 98 nt0.8□□□□□ -2.28
YHR054CP38780 SEC8YPR055W 3198 nt0.8□□□□□ -2.28
YHR054CP38780 NPR2YEL062W 1848 nt0.78□□□□□ -2.28
YHR054CP38780 YGL041CYGL041C 204 nt0.78□□□□□ -2.28
YHR054CP38780 PAU12YGR294W 363 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)BtT(AGU)B 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)CtT(AGU)C 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)DtT(AGU)D 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)HtT(AGU)H 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)I1tT(AGU)I1 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)I2tT(AGU)I2 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)JtT(AGU)J 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)N1tT(AGU)N1 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)N2tT(AGU)N2 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)O1tT(AGU)O1 73 nt0.78□□□□□ -2.28
YHR054CP38780 tT(AGU)O2tT(AGU)O2 73 nt0.78□□□□□ -2.28
YHR054CP38780 YLR282CYLR282C 342 nt0.78□□□□□ -2.28
YHR054CP38780 YPR160W-AYPR160W-A 81 nt0.78□□□□□ -2.28
YHR054CP38780 CHS6YJL099W 2241 nt0.78□□□□□ -2.28
YHR054CP38780 YGL123C-AYGL123C-A 231 nt0.77□□□□□ -2.29
YHR054CP38780 YGL188C-AYGL188C-A 141 nt0.77□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 86.3 ms