Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrif1Q8CDD9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrif1Q8CDD9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrif1Q8CDD9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrif1Q8CDD9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms