Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YMR031W-AYMR031W-A 327 nt0.63□□□□□ -2.31
RRP40Q08285 IES4YOR189W 351 nt0.63□□□□□ -2.31
RRP40Q08285 YPL229WYPL229W 621 nt0.63□□□□□ -2.31
RRP40Q08285 YHL041WYHL041W 450 nt0.62□□□□□ -2.31
RRP40Q08285 YLR101CYLR101C 396 nt0.62□□□□□ -2.31
RRP40Q08285 YBL008W-AYBL008W-A 240 nt0.62□□□□□ -2.31
RRP40Q08285 TOM22YNL131W 459 nt0.62□□□□□ -2.31
RRP40Q08285 BFR2YDR299W 1605 nt0.6□□□□□ -2.31
RRP40Q08285 YMR160WYMR160W 2451 nt0.6□□□□□ -2.31
RRP40Q08285 YOR282WYOR282W 321 nt0.6□□□□□ -2.31
RRP40Q08285 GEA2YEL022W 4380 nt0.6□□□□□ -2.31
RRP40Q08285 UTP20YBL004W 7482 nt0.6□□□□□ -2.31
RRP40Q08285 INP2YMR163C 2118 nt0.59□□□□□ -2.31
RRP40Q08285 YAP6YDR259C 1152 nt0.59□□□□□ -2.31
RRP40Q08285 YNL058CYNL058C 951 nt0.59□□□□□ -2.31
RRP40Q08285 YNL303WYNL303W 348 nt0.59□□□□□ -2.31
RRP40Q08285 MRPL50YNR022C 420 nt0.59□□□□□ -2.31
RRP40Q08285 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
RRP40Q08285 snR41snR41 95 nt0.59□□□□□ -2.31
RRP40Q08285 NIP100YPL174C 2607 nt0.58□□□□□ -2.32
RRP40Q08285 CUL3YGR003W 2235 nt0.57□□□□□ -2.32
RRP40Q08285 YIR044CYIR044C 186 nt0.57□□□□□ -2.32
RRP40Q08285 RPL26AYLR344W 384 nt0.57□□□□□ -2.32
RRP40Q08285 NOP9YJL010C 2001 nt0.56□□□□□ -2.32
RRP40Q08285 ATG31YDR022C 591 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)BtF(GAA)B 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)FtF(GAA)F 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)GtF(GAA)G 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)H1tF(GAA)H1 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)H2tF(GAA)H2 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)MtF(GAA)M 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)P1tF(GAA)P1 73 nt0.56□□□□□ -2.32
RRP40Q08285 tF(GAA)P2tF(GAA)P2 73 nt0.56□□□□□ -2.32
RRP40Q08285 RPS20YHL015W 366 nt0.56□□□□□ -2.32
RRP40Q08285 ECM12YHR021W-A 456 nt0.56□□□□□ -2.32
RRP40Q08285 YKL083WYKL083W 615 nt0.56□□□□□ -2.32
RRP40Q08285 YAR047CYAR047C 321 nt0.56□□□□□ -2.32
RRP40Q08285 YJR011CYJR011C 786 nt0.55□□□□□ -2.32
RRP40Q08285 PMP1YCR024C-A 123 nt0.54□□□□□ -2.32
RRP40Q08285 MAM33YIL070C 801 nt0.54□□□□□ -2.32
RRP40Q08285 ISF1YMR081C 1017 nt0.54□□□□□ -2.32
RRP40Q08285 ATP19YOL077W-A 207 nt0.54□□□□□ -2.32
RRP40Q08285 YBR064WYBR064W 429 nt0.54□□□□□ -2.32
RRP40Q08285 LTE1YAL024C 4308 nt0.54□□□□□ -2.32
RRP40Q08285 PCF11YDR228C 1881 nt0.54□□□□□ -2.32
RRP40Q08285 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
RRP40Q08285 YGR174W-AYGR174W-A 87 nt0.53□□□□□ -2.32
RRP40Q08285 YHR063W-AYHR063W-A 336 nt0.53□□□□□ -2.32
RRP40Q08285 YLL007CYLL007C 1998 nt0.53□□□□□ -2.32
RRP40Q08285 YDR344CYDR344C 444 nt0.52□□□□□ -2.33
RRP40Q08285 RPL38YLR325C 237 nt0.52□□□□□ -2.33
RRP40Q08285 YBR206WYBR206W 324 nt0.52□□□□□ -2.33
RRP40Q08285 YCK3YER123W 1575 nt0.52□□□□□ -2.33
RRP40Q08285 FMP27YLR454W 7887 nt0.52□□□□□ -2.33
RRP40Q08285 YML002WYML002W 2214 nt0.52□□□□□ -2.33
RRP40Q08285 RPS24BYIL069C 408 nt0.51□□□□□ -2.33
RRP40Q08285 CHS6YJL099W 2241 nt0.51□□□□□ -2.33
RRP40Q08285 YOR218CYOR218C 420 nt0.51□□□□□ -2.33
RRP40Q08285 YPL185WYPL185W 396 nt0.51□□□□□ -2.33
RRP40Q08285 YOR032W-AYOR032W-A 201 nt0.5□□□□□ -2.33
RRP40Q08285 YPR002C-AYPR002C-A 198 nt0.5□□□□□ -2.33
RRP40Q08285 NPR2YEL062W 1848 nt0.49□□□□□ -2.33
RRP40Q08285 MCM10YIL150C 1716 nt0.49□□□□□ -2.33
RRP40Q08285 PTP2YOR208W 2253 nt0.49□□□□□ -2.33
RRP40Q08285 YKL145W-AYKL145W-A 93 nt0.48□□□□□ -2.33
RRP40Q08285 YML007C-AYML007C-A 111 nt0.48□□□□□ -2.33
RRP40Q08285 OLI1Q0130 231 nt0.47□□□□□ -2.33
RRP40Q08285 YLR456WYLR456W 615 nt0.47□□□□□ -2.33
RRP40Q08285 YPL044CYPL044C 549 nt0.47□□□□□ -2.33
RRP40Q08285 QCR9YGR183C 201 nt0.46□□□□□ -2.34
RRP40Q08285 ASE1YOR058C 2658 nt0.45□□□□□ -2.34
RRP40Q08285 YDR426CYDR426C 378 nt0.44□□□□□ -2.34
RRP40Q08285 BSC3YLR465C 309 nt0.44□□□□□ -2.34
RRP40Q08285 YSP1YHR155W 3687 nt0.44□□□□□ -2.34
RRP40Q08285 ULP2YIL031W 3105 nt0.43□□□□□ -2.34
RRP40Q08285 BIR1YJR089W 2865 nt0.42□□□□□ -2.34
RRP40Q08285 PAU12YGR294W 363 nt0.42□□□□□ -2.34
RRP40Q08285 YLR406C-AYLR406C-A 150 nt0.42□□□□□ -2.34
RRP40Q08285 FYV10YIL097W 1551 nt0.4□□□□□ -2.34
RRP40Q08285 PAA1YDR071C 576 nt0.4□□□□□ -2.35
RRP40Q08285 YLR434CYLR434C 384 nt0.4□□□□□ -2.35
RRP40Q08285 YOL014WYOL014W 375 nt0.4□□□□□ -2.35
RRP40Q08285 SPO21YOL091W 1830 nt0.38□□□□□ -2.35
RRP40Q08285 RPL26BYGR034W 384 nt0.38□□□□□ -2.35
RRP40Q08285 YIL134C-AYIL134C-A 204 nt0.38□□□□□ -2.35
RRP40Q08285 YJL007CYJL007C 315 nt0.38□□□□□ -2.35
RRP40Q08285 PCC1YKR095W-A 267 nt0.38□□□□□ -2.35
RRP40Q08285 STE5YDR103W 2754 nt0.38□□□□□ -2.35
RRP40Q08285 TRS65YGR166W 1683 nt0.37□□□□□ -2.35
RRP40Q08285 HMRA2YCR096C 360 nt0.37□□□□□ -2.35
RRP40Q08285 YFR012W-AYFR012W-A 87 nt0.37□□□□□ -2.35
RRP40Q08285 YLR334CYLR334C 381 nt0.37□□□□□ -2.35
RRP40Q08285 VPS20YMR077C 666 nt0.37□□□□□ -2.35
RRP40Q08285 YOR011W-AYOR011W-A 207 nt0.37□□□□□ -2.35
RRP40Q08285 YOR053WYOR053W 342 nt0.37□□□□□ -2.35
RRP40Q08285 YJL127W-AYJL127W-A 117 nt0.36□□□□□ -2.35
RRP40Q08285 YKL063CYKL063C 504 nt0.36□□□□□ -2.35
RRP40Q08285 YNL211CYNL211C 261 nt0.36□□□□□ -2.35
RRP40Q08285 YPL068CYPL068C 882 nt0.36□□□□□ -2.35
RRP40Q08285 HAL9YOL089C 3093 nt0.35□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 61.7 ms